Discovery of a Tambjamine Gene Cluster in Streptomyces Suggests Convergent Evolution in Bipyrrole Natural Product Biosynthesis

被引:10
作者
Grenade, Neil L. [1 ]
Chiriac, Dragos S. [1 ]
Pasternak, A. R. Ola [1 ]
Babulic, Jonathan L. [1 ]
Rowland, Bronwyn E. [1 ]
Howe, Graeme W. [1 ]
Ross, Avena C. [1 ]
机构
[1] Queens Univ, Dept Chem, Kingston, ON K7L 3N6, Canada
关键词
ANTITUMOR SUBSTANCE; COELICOLOR A3(2); RED PIGMENT; PRODIGIOSIN; IDENTIFICATION; BE-18591;
D O I
10.1021/acschembio.2c00685
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
While bacterial natural products are a valuable source of therapeutics, the molecules produced by most biosynthetic gene clusters remain unknown. Tambjamine YP1, produced by Pseudoalteromonas tunicata, is partially derived from fatty acids siphoned from primary metabolism. A structurally similar tambjamine produced by Streptomyces, BE-18591, had not been linked to a gene cluster. Using enzymes putatively implicated in the construction of these two tambjamines, we used sequence similarity networks and gene knockout experiments to identify the biosynthetic gene cluster responsible for the production of tambjamine BE -18591 in Streptomyces albus. Despite the structural similarities between YP1 and BE-18591, the biosynthesis of the alkylamine tails of these molecules differs significantly, with the S. albus gene cluster putatively encoding a dedicated system for the construction of the fatty acid precursor to BE-18591. These different pathways in Pseudoalteromonas and Streptomyces suggest that evolutionary convergence is operative, with similar selective pressures leading to the emergence of structurally similar tambjamine natural products using different biosynthetic logic.
引用
收藏
页码:223 / 229
页数:7
相关论文
共 35 条
  • [1] Microbial genome mining for accelerated natural products discovery: is a renaissance in the making?
    Bachmann, Brian O.
    Van Lanen, Steven G.
    Baltz, Richard H.
    [J]. JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, 2014, 41 (02) : 175 - 184
  • [2] Identification of Compounds with Bioactivity against the Nematode Caenorhabditis elegans by a Screen Based on the Functional Genomics of the Marine Bacterium Pseudoalteromonas tunicata D2
    Ballestriero, Francesco
    Thomas, Torsten
    Burke, Catherine
    Egan, Suhelen
    Kjelleberg, Staffan
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2010, 76 (17) : 5710 - 5717
  • [3] antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification
    Blin, Kai
    Wolf, Thomas
    Chevrette, Marc G.
    Lu, Xiaowen
    Schwalen, Christopher J.
    Kautsar, Satria A.
    Duran, Hernando G. Suarez
    Santos, Emmanuel L. C. de los
    Kim, Hyun Uk
    Nave, Mariana
    Dickschat, Jeroen S.
    Mitchell, Douglas A.
    Shelest, Ekaterina
    Breitling, Rainer
    Takano, Eriko
    Lee, Sang Yup
    Weber, Tilmann
    Medema, Marnix H.
    [J]. NUCLEIC ACIDS RESEARCH, 2017, 45 (W1) : W36 - W41
  • [4] Natural products - a simple model to explain chemical diversity
    Firn, RD
    Jones, CG
    [J]. NATURAL PRODUCT REPORTS, 2003, 20 (04) : 382 - 391
  • [5] Mechanisms of prodigiosin cytotoxicity in human neuroblastoma cell lines
    Francisco, Roser
    Perez-Tomas, Ricardo
    Gimenez-Bonafe, Pepita
    Soto-Cerrato, Vanessa
    Gimenez-Xavier, Pol
    Ambrosio, Santiago
    [J]. EUROPEAN JOURNAL OF PHARMACOLOGY, 2007, 572 (2-3) : 111 - 119
  • [6] Isolation and structure elucidation of a novel yellow pigment from the marine bacterium Pseudoalteromonas tunicata
    Franks, A
    Haywood, P
    Holmström, C
    Egan, S
    Kjelleberg, S
    Kumar, N
    [J]. MOLECULES, 2005, 10 (10) : 1286 - 1291
  • [7] Dereplication: racing to speed up the natural products discovery process
    Gaudencio, Susana P.
    Pereira, Florbela
    [J]. NATURAL PRODUCT REPORTS, 2015, 32 (06) : 779 - 810
  • [8] The convergence of bacterial natural products from evolutionarily distinct pathways
    Grenade, Neil L.
    Howe, Graeme W.
    Ross, Avena C.
    [J]. CURRENT OPINION IN BIOTECHNOLOGY, 2021, 69 : 17 - 25
  • [9] STRUCTURE OF A NEW ANTIBIOTIC, ROSEOPHILIN
    HAYAKAWA, Y
    KAWAKAMI, K
    SETO, H
    FURIHATA, K
    [J]. TETRAHEDRON LETTERS, 1992, 33 (19) : 2701 - 2704
  • [10] Structure, Chemical Synthesis, and Biosynthesis of Prodiginine Natural Products
    Hu, Dennis X.
    Withall, David M.
    Challis, Gregory L.
    Thomson, Regan J.
    [J]. CHEMICAL REVIEWS, 2016, 116 (14) : 7818 - 7853