Thermococcus argininiproducens sp. nov., an arginine biosynthesis archaeal species isolated from the Central Indian Ocean ridge

被引:2
|
作者
Park, Yeong-Jun [1 ,2 ]
Lim, Jae Kyu [1 ,2 ]
Kim, Yun Jae [1 ,2 ]
Yang, Sung-Hyun [1 ]
Lee, Hyun Sook [1 ,2 ]
Kang, Sung Gyun [1 ,2 ]
Lee, Jung-Hyun [1 ,2 ]
Yang, Youngik [1 ,3 ]
Kwon, Kae Kyoung [1 ,2 ]
机构
[1] Korea Inst Ocean Sci & Technol, Busan 49111, South Korea
[2] Univ Sci & Technol, KIOST Sch, Daejeon 34113, South Korea
[3] Natl Marine Biodivers Inst Korea, Seocheon Gun 33662, South Korea
关键词
arginine biosynthesis; Central Indian Ocean Ridge; hydrothermal vent; Onnuri vent field; thermococcus; HYPERTHERMOPHILIC ARCHAEON; THERMOPHILIC ARCHAEA; REPRESENTS; GENE;
D O I
10.1099/ijsem.0.005760
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A strictly anaerobic hyperthermophilic archaeon, designated strain IOH2T, was isolated from a deep -sea hydrothermal vent (Onnuri vent field) area on the Central Indian Ocean Ridge. Strain IOH2T showed high 16S rRNA gene sequence similarity to Thermococcus sibiricus MM 739T (99.42%), Thermococcus alcaliphilus DSM 10322T (99.28%), Thermococcus aegaeus P5T (99.21 %), Thermococcus litoralis DSM 5473T (99.13 %), ' bergensis'Thermococcus T7324T (99.13 %), Thermococcus aggregans TYT (98.92 %) and Thermococcus prieurii Bio-pl-0405IT2T (98.01 %), with all other strains showing lower than 98 % similarity. The average nucleotide identity and in silico DNA-DNA hybridization values were highest between strain IOH2T and T. sibiricus MM 739T (79.33 and 15.00 %, respectively); these values are much lower than the species delineation cut -offs. Cells of strain IOH2T were coccoid, 1.0-1.2 mu m in diameter and had no flagella. Growth ranges were 60-85 degrees C (optimum at 80 degrees C), pH 4.5-8.5 (optimum at pH 6.3) and 2.0-6.0 % (optimum at 4.0 %) NaCl. Growth of strain IOH2T was enhanced by starch, glucose, maltodextrin and pyru-vate as a carbon source, and elemental sulphur as an electron acceptor. Through genome analysis of strain IOH2T, arginine bio-synthesis related genes were predicted, and growth of strain IOH2T without arginine was confirmed. The genome of strain IOH2T was assembled as a circular chromosome of 1 946 249 bp and predicted 2096 genes. The DNA G+C content was 39.44 mol%. Based on the results of physiological and phylogenetic analyses, Thermococcus argininiproducens sp. nov. is proposed with type strain IOH2T (=MCCC 4K00089T=KCTC 25190T).
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页数:7
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