Thermococcus argininiproducens sp. nov., an arginine biosynthesis archaeal species isolated from the Central Indian Ocean ridge

被引:2
|
作者
Park, Yeong-Jun [1 ,2 ]
Lim, Jae Kyu [1 ,2 ]
Kim, Yun Jae [1 ,2 ]
Yang, Sung-Hyun [1 ]
Lee, Hyun Sook [1 ,2 ]
Kang, Sung Gyun [1 ,2 ]
Lee, Jung-Hyun [1 ,2 ]
Yang, Youngik [1 ,3 ]
Kwon, Kae Kyoung [1 ,2 ]
机构
[1] Korea Inst Ocean Sci & Technol, Busan 49111, South Korea
[2] Univ Sci & Technol, KIOST Sch, Daejeon 34113, South Korea
[3] Natl Marine Biodivers Inst Korea, Seocheon Gun 33662, South Korea
关键词
arginine biosynthesis; Central Indian Ocean Ridge; hydrothermal vent; Onnuri vent field; thermococcus; HYPERTHERMOPHILIC ARCHAEON; THERMOPHILIC ARCHAEA; REPRESENTS; GENE;
D O I
10.1099/ijsem.0.005760
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A strictly anaerobic hyperthermophilic archaeon, designated strain IOH2T, was isolated from a deep -sea hydrothermal vent (Onnuri vent field) area on the Central Indian Ocean Ridge. Strain IOH2T showed high 16S rRNA gene sequence similarity to Thermococcus sibiricus MM 739T (99.42%), Thermococcus alcaliphilus DSM 10322T (99.28%), Thermococcus aegaeus P5T (99.21 %), Thermococcus litoralis DSM 5473T (99.13 %), ' bergensis'Thermococcus T7324T (99.13 %), Thermococcus aggregans TYT (98.92 %) and Thermococcus prieurii Bio-pl-0405IT2T (98.01 %), with all other strains showing lower than 98 % similarity. The average nucleotide identity and in silico DNA-DNA hybridization values were highest between strain IOH2T and T. sibiricus MM 739T (79.33 and 15.00 %, respectively); these values are much lower than the species delineation cut -offs. Cells of strain IOH2T were coccoid, 1.0-1.2 mu m in diameter and had no flagella. Growth ranges were 60-85 degrees C (optimum at 80 degrees C), pH 4.5-8.5 (optimum at pH 6.3) and 2.0-6.0 % (optimum at 4.0 %) NaCl. Growth of strain IOH2T was enhanced by starch, glucose, maltodextrin and pyru-vate as a carbon source, and elemental sulphur as an electron acceptor. Through genome analysis of strain IOH2T, arginine bio-synthesis related genes were predicted, and growth of strain IOH2T without arginine was confirmed. The genome of strain IOH2T was assembled as a circular chromosome of 1 946 249 bp and predicted 2096 genes. The DNA G+C content was 39.44 mol%. Based on the results of physiological and phylogenetic analyses, Thermococcus argininiproducens sp. nov. is proposed with type strain IOH2T (=MCCC 4K00089T=KCTC 25190T).
引用
收藏
页数:7
相关论文
共 50 条
  • [1] Thermococcus indicus sp. nov., a Fe(III)-reducing hyperthermophilic archaeon isolated from the Onnuri Vent Field of the Central Indian Ocean ridge
    Jae Kyu Lim
    Yun Jae Kim
    Jhung-Ahn Yang
    Teddy Namirimu
    Sung-Hyun Yang
    Mi-Jeong Park
    Yong Min Kwon
    Hyun Sook Lee
    Sung Gyun Kang
    Jung-Hyun Lee
    Kae Kyoung Kwon
    Journal of Microbiology, 2020, 58 : 260 - 267
  • [2] Thermococcus indicus sp. nov., a Fe(III)-reducing hyperthermophilic archaeon isolated from the Onnuri Vent Field of the Central Indian Ocean ridge
    Lim, Jae Kyu
    Kim, Yun Jae
    Yang, Jhung-Ahn
    Namirimu, Teddy
    Yang, Sung-Hyun
    Park, Mi-Jeong
    Kwon, Yong Min
    Lee, Hyun Sook
    Kang, Sung Gyun
    Lee, Jung-Hyun
    Kwon, Kae Kyoung
    JOURNAL OF MICROBIOLOGY, 2020, 58 (04) : 260 - 267
  • [3] Thermococcus thermotolerans sp. nov., a hyperthermophilic archaeon isolated from a chimney in the Southwest Indian Ocean
    Yang, Yi
    Leng, Hao
    Fan, Qilian
    Xiao, Xiang
    Zhao, Weishu
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (12)
  • [4] Cerasicoccus fimbriatus sp. nov., isolated from the mid-ridge of the Southwest Indian Ocean
    Qiu, Xuanyun
    Chen, Beihan
    Lin, Dan
    Liu, Guohua
    Su, Zhiyi
    Zhang, Mingzhe
    Tang, Kai
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2025, 118 (01):
  • [5] Alteromonas profundi sp. nov., isolated from the Indian Ocean
    Shen, Xudong
    Zhu, Sidong
    Dong, Bingxia
    Chen, Yong
    Xue, Zehao
    Ren, Na
    Chen, Ting
    Chen, Xiunuan
    Yang, Jifang
    Chen, Jigang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (08) : 4531 - 4536
  • [6] Indioceanicola profundi gen. nov., sp. nov., isolated from Indian Ocean sediment
    Chen, Rou-Wen
    Wang, Ke-Xin
    Zhou, Xue-Feng
    Long, Chao
    Tian, Xin-Peng
    Long, Li-Juan
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (12) : 3707 - 3712
  • [7] Devosia indica sp. nov., isolated from surface seawater in the Indian Ocean
    Lin, Danqiu
    Huang, Yizhe
    Chen, Yong
    Zhu, Sidong
    Yang, Jifang
    Chen, Jigang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (01) : 340 - 345
  • [8] Gulosibacter sediminis sp. nov., isolated from Indian Ocean marine sediment
    Jiang, Zhao
    Zhang, Wei-Hua
    Song, Dan
    Xiao, Min
    Phurbu, Dorji
    Liu, Bing-Bing
    Guo, Shu-Xian
    Chen, Wei
    Li, Wen-Jun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (07)
  • [9] Thioclava indica sp. nov., isolated from surface seawater of the Indian Ocean
    Yang Liu
    Qiliang Lai
    Juan Du
    Hongxiu Xu
    Lijing Jiang
    Zongze Shao
    Antonie van Leeuwenhoek, 2015, 107 : 297 - 304
  • [10] Paracoccus indicus sp. nov., isolated from surface seawater in the Indian Ocean
    Lin, Danqiu
    Zhu, Sidong
    Chen, Yong
    Huang, Yizhe
    Yang, Jifang
    Chen, Jigang
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (06): : 927 - 933