Analysis of whiB7 in Mycobacterium tuberculosis reveals novel AT-hook deletion mutations

被引:1
作者
Davies-Bolorunduro, Olabisi Flora [1 ,2 ,3 ]
Jaemsai, Bharkbhoom [2 ]
Ruangchai, Wuthiwat [1 ]
Phumiphanjarphak, Worakorn [2 ]
Aiewsakun, Pakorn [1 ,2 ]
Palittapongarnpim, Prasit [1 ,2 ]
机构
[1] Mahidol Univ, Fac Sci, Pornchai Matangkasombut Ctr Microbial Genom, Dept Microbiol, Rama 6 Rd, Bangkok 10400, Thailand
[2] Mahidol Univ, Fac Sci, Dept Microbiol, Rama 6 Rd, Bangkok 10400, Thailand
[3] Nigerian Inst Med Res, Ctr TB Res, Microbiol Dept, PMB 2013,6 Edmund Crescent, Lagos 101012, Nigeria
关键词
INTRINSIC ANTIBIOTIC-RESISTANCE; TRANSCRIPTIONAL ACTIVATOR; DRUG-RESISTANCE; GENE; SELECTION; GENOME; MODEL;
D O I
10.1038/s41598-023-40152-2
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Mutations in whiB7 have been associated with both hypersusceptibility and resistance to various antibiotics in Mycobacterium tuberculosis (Mtb). Unlocking the secrets of antibiotic resistance in the bacterium, we examined mutations in the coding sequences of whiB7 of over 40,000 diverse Mtb isolates. Our results unveil the dominant c.191delG (Gly64delG) mutation, present in all members of the lineage L1.2.2 and its impact on WhiB7's conserved GVWGG-motif, causing conformational changes and deletion of the C-terminal AT-hook. Excitingly, we discovered six unique mutations associated with partial or total deletion of the AT-hook, specific to certain sublineages. Our findings suggest the selective pressures driving these mutations, underlining the potential of genomics to advance our understanding of Mtb's antibiotic resistance. As tuberculosis remains a global health threat, our study offers valuable insights into the diverse nature and functional consequences of whiB7 mutations, paving the way for the development of novel therapeutic interventions.
引用
收藏
页数:9
相关论文
共 50 条
  • [41] Pangenome Analysis of Mycobacterium tuberculosis Reveals Core-Drug Targets and Screening of Promising Lead Compounds for Drug Discovery
    Dar, Hamza Arshad
    Zaheer, Tahreem
    Ullah, Nimat
    Bakhtiar, Syeda Marriam
    Zhang, Tianyu
    Yasir, Muhammad
    Azhar, Esam I.
    Ali, Amjad
    ANTIBIOTICS-BASEL, 2020, 9 (11): : 1 - 14
  • [42] Pyrosequencing analysis for mutations in embB codon306 among clinical mycobacterium tuberculosis isolates from Qingdao, China
    Zhang, Huaqiang
    Chen, Xiaoguang
    Wang, Zhongdong
    Ren, Zhisheng
    Wu, Jie
    Sun, Haiyan
    Bai, Xue
    INTERNATIONAL JOURNAL OF CLINICAL AND EXPERIMENTAL MEDICINE, 2015, 8 (07): : 11276 - 11282
  • [43] rpoB Mutations Causing Discordant Rifampicin Susceptibility in Mycobacterium tuberculosis: Retrospective Analysis of Prevalence, Phenotypic, Genotypic, and Treatment Outcomes
    Mvelase, Nomonde R.
    Pillay, Melendhran
    Sibanda, Wilbert
    Ngozo, Jacqueline N.
    Brust, James C. M.
    Mlisana, Koleka P.
    OPEN FORUM INFECTIOUS DISEASES, 2019, 6 (04):
  • [44] Detection of Mutations in Mycobacterium tuberculosis pncA Gene by Modified High-Resolution Melting Curve Analysis of PCR Products
    Filipenko, M. L.
    Dymova, M. A.
    Cherednichenko, A. G.
    Khrapov, E. A.
    Mishukova, O. V.
    Schwartz, Ya. Sh.
    BULLETIN OF EXPERIMENTAL BIOLOGY AND MEDICINE, 2019, 168 (02) : 264 - 269
  • [45] Comparative Whole-Genomic Analysis of an Ancient L2 Lineage Mycobacterium tuberculosis Reveals a Novel Phylogenetic Clade and Common Genetic Determinants of Hypervirulent Strains
    Rajwani, Rahim
    Yam, Wing Cheong
    Zhang, Ying
    Kang, Yu
    Wong, Barry Kin Chung
    Leung, Kenneth Siu Sing
    Tam, Kingsley King Gee
    Tulu, Ketema Tafess
    Zhu, Li
    Siu, Gilman Kit Hang
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2018, 7
  • [46] Frequency of Codon 306 Mutations in embB Gene of Mycobacterium tuberculosis Resistant to Ethambutol: A Systematic Review and Meta-Analysis
    Mohammadi, Bahman
    Ramazanzadeh, Rashid
    Nouri, Bijan
    Rouhi, Samaneh
    INTERNATIONAL JOURNAL OF PREVENTIVE MEDICINE, 2020, 11 (01)
  • [47] A 10-Year Comparative Analysis Shows that Increasing Prevalence of Rifampin-Resistant Mycobacterium tuberculosis in China Is Associated with the Transmission of Strains Harboring Compensatory Mutations
    Huo, Fengmin
    Luo, Jingjing
    Shi, Jin
    Zong, Zhaojing
    Jing, Wei
    Dong, Wenzhu
    Dong, Lingling
    Ma, Yifeng
    Liang, Qian
    Shang, Yuanyuan
    Huang, Hairong
    Pang, Yu
    ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2018, 62 (04)
  • [48] Deciphering the mechanism of resistance by novel double mutations in pncA in Mycobacterium tuberculosis using protein structural graphs (PSG) and structural bioinformatic approaches
    Alshabrmi, Fahad M.
    Alatawi, Eid A.
    COMPUTERS IN BIOLOGY AND MEDICINE, 2023, 154
  • [49] aCGH Analysis Reveals Novel Mutations Associated with Congenital Diaphragmatic Hernia Plus (CDH plus )
    Schreiner, Yannick
    Stoll, Teresa
    Nowak, Oliver
    Weis, Meike
    Hetjens, Svetlana
    Steck, Eric
    Ortiz, Alba Perez
    Rafat, Neysan
    JOURNAL OF CLINICAL MEDICINE, 2023, 12 (19)
  • [50] Longitudinal whole genome analysis of pre and post drug treatment Mycobacterium tuberculosis isolates reveals progressive steps to drug resistance
    Datta, Gargi
    Nieto, Luisa M.
    Davidson, Rebecca M.
    Mehaffy, Carolina
    Pederson, Caroline
    Dobos, Karen M.
    Strong, Michael
    TUBERCULOSIS, 2016, 98 : 50 - 55