共 100 条
Dynamics and interactions of intrinsically disordered proteins
被引:18
作者:

Arai, Munehito
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan
Univ Tokyo, Coll Arts & Sci, Komaba Org Educ Excellence, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan
Univ Tokyo, Grad Sch Sci, Dept Phys, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan

Suetaka, Shunji
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan

Ooka, Koji
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Tokyo, Coll Arts & Sci, Komaba Org Educ Excellence, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan
机构:
[1] Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan
[2] Univ Tokyo, Coll Arts & Sci, Komaba Org Educ Excellence, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan
[3] Univ Tokyo, Grad Sch Sci, Dept Phys, 3-8-1 Komaba, Meguro, Tokyo 1538902, Japan
关键词:
BINDING;
DOMAIN;
RECOGNITION;
INHIBITION;
MECHANISMS;
SELECTION;
D O I:
10.1016/j.sbi.2023.102734
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
Intrinsically disordered proteins (IDPs) are widespread in eukaryotes and participate in a variety of important cellular processes. Numerous studies using state-of-the-art experimental and theoretical methods have advanced our understanding of IDPs and revealed that disordered regions engage in a large repertoire of intra- and intermolecular interactions through their conformational dynamics, thereby regulating many intracellular functions in concert with folded domains. The mechanisms by which IDPs interact with their partners are diverse, depending on their conformational propensities, and include induced fit, conformational selection, and their mixtures. In addition, IDPs are implicated in many diseases, and progress has been made in designing inhibitors of IDP-mediated interactions. Here we review these recent advances with a focus on the dynamics and interactions of IDPs.
引用
收藏
页数:10
相关论文
共 100 条
[1]
A Unified Description of Intrinsically Disordered Protein Dynamics under Physiological Conditions Using NMR Spectroscopy
[J].
Adamski, Wiktor
;
Salvi, Nicola
;
Maurin, Damien
;
Magnat, Justine
;
Milles, Sigrid
;
Jensen, Malene Ringkjobing
;
Abyzov, Anton
;
Moreau, Christophe J.
;
Blackledge, Martin
.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
2019, 141 (44)
:17817-17829

Adamski, Wiktor
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Salvi, Nicola
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Maurin, Damien
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Magnat, Justine
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Milles, Sigrid
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Jensen, Malene Ringkjobing
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Abyzov, Anton
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Moreau, Christophe J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France

Blackledge, Martin
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France Univ Grenoble Alpes, CEA, CNRS, Inst Biol Struct, 71 Ave Martyrs, Grenoble, France
[2]
NMR insights into dynamic, multivalent interactions of intrinsically disordered regions: from discrete complexes to condensates
[J].
Ahmed, Rashik
;
Forman-Kay, Julie D.
.
ESSAYS IN BIOCHEMISTRY,
2022, 66 (07)
:863-873

Ahmed, Rashik
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Program Mol Med, Toronto, ON M5G 0A4, Canada Hosp Sick Children, Program Mol Med, Toronto, ON M5G 0A4, Canada

Forman-Kay, Julie D.
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Program Mol Med, Toronto, ON M5G 0A4, Canada
Univ Toronto, Dept Biochem, Toronto, ON M5S 1A8, Canada Hosp Sick Children, Program Mol Med, Toronto, ON M5G 0A4, Canada
[3]
Unified understanding of folding and binding mechanisms of globular and intrinsically disordered proteins
[J].
Arai M.
.
Biophysical Reviews,
2018, 10 (2)
:163-181

Arai M.
论文数: 0 引用数: 0
h-index: 0
机构:
Department of Life Sciences, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro, Tokyo Department of Life Sciences, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro, Tokyo
[4]
Conformational propensities of intrinsically disordered proteins influence the mechanism of binding and folding
[J].
Arai, Munehito
;
Sugase, Kenji
;
Dyson, H. Jane
;
Wright, Peter E.
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2015, 112 (31)
:9614-9619

Arai, Munehito
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA
Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, Meguro Ku, Tokyo 1538902, Japan
Japan Sci & Technol Agcy, Precursory Res Embryon Sci & Technol, Kawaguchi, Saitama 3320012, Japan Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA

Sugase, Kenji
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA

Dyson, H. Jane
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA

Wright, Peter E.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
[5]
Quantitative Analysis of Multisite Protein-Ligand Interactions by NMR: Binding of Intrinsically Disordered p53 Transactivation Subdomains with the TAZ2 Domain of CBP
[J].
Arai, Munehito
;
Ferreon, Josephine C.
;
Wright, Peter E.
.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
2012, 134 (08)
:3792-3803

Arai, Munehito
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA
AIST, Inst Biol Resources & Funct, Tsukuba, Ibaraki 3058566, Japan
Univ Tokyo, Grad Sch Arts & Sci, Dept Life Sci, Meguro Ku, Tokyo 1538902, Japan
JST, PRESTO, Kawaguchi, Saitama 3320012, Japan Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA

Ferreon, Josephine C.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA

Wright, Peter E.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
[6]
Folding of an intrinsically disordered protein by phosphorylation as a regulatory switch
[J].
Bah, Alaji
;
Vernon, Robert M.
;
Siddiqui, Zeba
;
Krzeminski, Mickael
;
Muhandiram, Ranjith
;
Zhao, Charlie
;
Sonenberg, Nahum
;
Kay, Lewis E.
;
Forman-Kay, Julie D.
.
NATURE,
2015, 519 (7541)
:106-U240

Bah, Alaji
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada
Univ Toronto, Dept Biochem, Toronto, ON M5S 1A8, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Vernon, Robert M.
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada
Univ Toronto, Dept Biochem, Toronto, ON M5S 1A8, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Siddiqui, Zeba
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Krzeminski, Mickael
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada
Univ Toronto, Dept Biochem, Toronto, ON M5S 1A8, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Muhandiram, Ranjith
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Toronto, Dept Biochem, Toronto, ON M5S 1A8, Canada
Univ Toronto, Dept Mol Genet, Toronto, ON M5S 1A8, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Zhao, Charlie
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Sonenberg, Nahum
论文数: 0 引用数: 0
h-index: 0
机构:
McGill Univ, Dept Biochem, Montreal, PQ H3G 1Y6, Canada
McGill Univ, Goodman Canc Res Ctr, Montreal, PQ H3G 1Y6, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Kay, Lewis E.
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada
Univ Toronto, Dept Biochem, Toronto, ON M5S 1A8, Canada
Univ Toronto, Dept Mol Genet, Toronto, ON M5S 1A8, Canada
Univ Toronto, Dept Chem, Toronto, ON M5S 3H6, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada

Forman-Kay, Julie D.
论文数: 0 引用数: 0
h-index: 0
机构:
Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada
Univ Toronto, Dept Biochem, Toronto, ON M5S 1A8, Canada Hosp Sick Children, Mol Struct & Funct Program, Toronto, ON M5G 0A4, Canada
[7]
Mutual induced-fit mechanism drives binding between intrinsically disordered Bim and cryptic binding site of Bcl-xL
[J].
Bekker, Gert-Jan
;
Araki, Mitsugu
;
Oshima, Kanji
;
Okuno, Yasushi
;
Kamiya, Narutoshi
.
COMMUNICATIONS BIOLOGY,
2023, 6 (01)

Bekker, Gert-Jan
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan

论文数: 引用数:
h-index:
机构:

Oshima, Kanji
论文数: 0 引用数: 0
h-index: 0
机构:
KANEKA Corp, Biopharm Res Labs, 1-8 Miyamae Cho,Takasago Cho, Takasago, Hyogo 6768688, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan

Okuno, Yasushi
论文数: 0 引用数: 0
h-index: 0
机构:
Kyoto Univ, Grad Sch Med, 53 Shogoin Kawaharacho,Sakyo Ku, Kyoto 6068507, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan

Kamiya, Narutoshi
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Hyogo, Grad Sch Informat Sci, 7-1-28 Minatojima Minami Machi,Chuo Ku, Kobe, Hyogo 6500047, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan
[8]
Mutual population-shift driven antibody-peptide binding elucidated by molecular dynamics simulations
[J].
Bekker, Gert-Jan
;
Fukuda, Ikuo
;
Higo, Junichi
;
Kamiya, Narutoshi
.
SCIENTIFIC REPORTS,
2020, 10 (01)

Bekker, Gert-Jan
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan

Fukuda, Ikuo
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Hyogo, Grad Sch Simulat Studies, Chuo Ku, 7-1-28 Minatojima Minami Machi, Kobe, Hyogo 6500047, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan

Higo, Junichi
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Hyogo, Grad Sch Simulat Studies, Chuo Ku, 7-1-28 Minatojima Minami Machi, Kobe, Hyogo 6500047, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan

Kamiya, Narutoshi
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Hyogo, Grad Sch Simulat Studies, Chuo Ku, 7-1-28 Minatojima Minami Machi, Kobe, Hyogo 6500047, Japan Osaka Univ, Inst Prot Res, 3-2 Yamadaoka, Suita, Osaka 5650871, Japan
[9]
Coupling of binding and differential subdomain folding of the intrinsically disordered transcription factor CREB
[J].
Bentley, Emily P. P.
;
Scholl, Daniel
;
Wright, Peter E. E.
;
Deniz, Ashok A. A.
.
FEBS LETTERS,
2023, 597 (07)
:917-932

Bentley, Emily P. P.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA

Scholl, Daniel
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA

Wright, Peter E. E.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA
Scripps Res Inst, Dept Integrat Struct & Computat Biol, 10550 N Torrey Pines Rd, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA

Deniz, Ashok A. A.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA
Scripps Res Inst, Dept Integrat Struct & Computat Biol, 10550 N Torrey Pines Rd, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA USA
[10]
Multivalency enables unidirectional switch-like competition between intrinsically disordered proteins
[J].
Berlow, Rebecca B.
;
Dyson, H. Jane
;
Wright, Peter E.
.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA,
2022, 119 (03)

Berlow, Rebecca B.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA

Dyson, H. Jane
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA

Wright, Peter E.
论文数: 0 引用数: 0
h-index: 0
机构:
Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA
Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA Scripps Res Inst, Dept Integrat Struct & Computat Biol, La Jolla, CA 92037 USA