Identification and verification of ferroptosis-related genes in diabetic foot using bioinformatics analysis

被引:12
作者
Wang, Xiaoxiang [1 ]
Dai, Shangtai [2 ]
Zheng, Wenlian [1 ]
Chen, Wentao [1 ]
Li, Jiehua [3 ,6 ]
Chen, Xiaodong [4 ,7 ]
Zhou, Sitong [3 ,6 ]
Yang, Ronghua [5 ,8 ]
机构
[1] Guangdong Med Univ, Clin Med Coll 1, Zhanjiang, Peoples R China
[2] Kunming Univ Sci & Technol, Peoples Hosp Yunnan Prov 1, Med Sch, Kunming, Peoples R China
[3] First Peoples Hosp Foshan, Dept Dermatol, Foshan, Peoples R China
[4] First Peoples Hosp Foshan, Dept Burn Surg & Skin Regenerat, Foshan, Peoples R China
[5] South China Univ Technol, Guangzhou Peoples Hosp 1, Dept Burn & Plast Surg, Guangzhou, Peoples R China
[6] First Peoples Hosp Foshan, Dept Dermatol, Foshan, Guangdong, Peoples R China
[7] First Peoples Hosp Foshan, Dept Burn Surg & Skin Regenerat, Foshan, Guangdong, Peoples R China
[8] South China Univ Technol, Guangzhou Peoples Hosp 1, Dept Burn & Plast Surg, Guangzhou, Guangdong, Peoples R China
基金
中国国家自然科学基金;
关键词
bioinformatics analysis; diabetic foot; ferroptosis; inflammatory reaction; TP53; CELL-DEATH; INFLAMMATION; TP53;
D O I
10.1111/iwj.14198
中图分类号
R75 [皮肤病学与性病学];
学科分类号
100206 ;
摘要
Ferroptosis is a novel form of cell death that plays a key role in several diseases, including inflammation and tumours; however, the role of ferroptosis-related genes in diabetic foot remains unclear. Herein, diabetic foot-related genes were downloaded from the Gene Expression Omnibus and the ferroptosis database (FerrDb). The least absolute shrinkage and selection operator regression algorithm was used to construct a related risk model, and differentially expressed genes were analysed through immune infiltration. Finally, we identified relevant core genes through a protein-protein interaction network, subsequently verified using immunohistochemistry. Comprehensive analysis showed 198 genes that were differentially expressed during ferroptosis. Based on functional enrichment analysis, these genes were primarily involved in cell response, chemical stimulation, and autophagy. Using the CIBERSORT algorithm, we calculated the immune infiltration of 22 different types of immune cells in diabetic foot and normal tissues. The protein-protein interaction network identified the hub gene TP53, and according to immunohistochemistry, the expression of TP53 was high in diabetic foot tissues but low in normal tissues. Accordingly, we identified the ferroptosis-related gene TP53 in the diabetic foot, which may play a key role in the pathogenesis of diabetic foot and could be used as a potential biomarker.
引用
收藏
页码:3191 / 3203
页数:13
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