Quantum mechanics/molecular mechanics studies on mechanistic photophysics of cytosine aza-analogues: 2,4-diamino-1,3,5-triazine and 2-amino-1,3,5-triazine in aqueous solution

被引:2
|
作者
Chang, Xue-Ping [1 ]
Zhao, Geng [1 ]
Zhang, Teng-Shuo [2 ]
Xie, Bin-Bin [3 ]
机构
[1] Xinyang Normal Univ, Coll Chem & Chem Engn, Xinyang 464000, Peoples R China
[2] Zhejiang Univ Technol, Coll Chem Engn, Hangzhou 310014, Peoples R China
[3] Zhejiang Normal Univ, Hangzhou Inst Adv Studies, Hangzhou 311231, Peoples R China
基金
中国国家自然科学基金;
关键词
EXCITED-STATE DYNAMICS; NONRADIATIVE DECAY MECHANISMS; ULTRAFAST DEACTIVATION; RELAXATION MECHANISMS; TRANSIENT ABSORPTION; PERTURBATION-THEORY; NUCLEIC-ACIDS; MEAN-FIELD; DNA; MODEL;
D O I
10.1039/d2cp05639a
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The excited-state properties and photophysics of cytosine aza-analogues, i.e., 2,4-diamino-1,3,5-triazine (2,4-DT) and 2-amino-1,3,5-triazine (2-AT) in solution have been systematically explored using the QM(MS-CASPT2//CASSCF)/MM approach. The excited-state nonradiative relaxation mechanisms for the initially photoexcited S-1(pi pi*) state decay back to the S-0 state are proposed in terms of the present computed minima, surface crossings (conical intersections and singlet-triplet crossings), and excited-state decay paths in the S-1, S-2, T-1, T-2, and S-0 states. Upon photoexcitation to the bright S-1(pi pi*) state, 2,4-DT quickly relaxes to its S-1 minimum and then overcomes a small energy barrier of 5.1 kcal mol(-1) to approach a S-1/S-0 conical intersection, where the S-1 system hops to the S-0 state through S-1 -> S-0 internal conversion (IC). In addition, at the S-1 minimum, the system could partially undergo intersystem crossing (ISC) to the T-1 state, followed by further ISC to the S-0 state via the T-1/S-0 crossing point. In the T-1 state, an energy barrier of 7.9 kcal mol(-1) will trap 2,4-DT for a while. In parallel, for 2-AT, the system first relaxes to the S-1 minimum and then S-1 -> S-0 IC or S-1 -> T-1 -> S-0 ISCs take place to the S-0 state by surmounting a large barrier of 15.3 kcal mol(-1) or 11.9 kcal mol(-1), respectively, which heavily suppress electronic transition to the S-0 state. Different from 2,4-DT, upon photoexcitation in the Franck-Condon region, 2-AT can quickly evolve in an essentially barrierless manner to nearby S-2/S-1 conical intersection, where the S-2 and T-1 states can be populated. Once it hops to the S-2 state, the system will overcome a relatively small barrier (6.6 kcal mol(-1)vs. 15.3 kcal mol(-1)) through IC to the S-0 state. Similarly, an energy barrier of 11.9 kcal mol(-1) heavily suppresses the T-1 state transformation to the S-0 state. The present work manifests that the amination/deamination of the triazine rings can affect some degree of different vertical and adiabatic excitation energies and nonradiative decay pathways in solution. It not only rationalizes excited-state decay dynamics of 2,4-DT and 2-AT in aqueous solution but could also provide insights into the understanding of the photophysics of aza-nucleobases.
引用
收藏
页码:7669 / 7680
页数:12
相关论文
共 8 条
  • [1] Structure, Antibacterial Activities and DNA Interaction of a Copper(II) Complex Derived from 2,4-Diamino-6-(2′-pyridyl)-1,3,5-triazine
    Ou Zhi-Bin
    Huang Shan-Hua
    Fu Xia-Bing
    Zhu Li
    Le Xue-Yi
    CHINESE JOURNAL OF INORGANIC CHEMISTRY, 2014, 30 (05) : 1017 - 1024
  • [2] Quantum mechanics/molecular mechanics studies on the excited-state decay mechanisms of cytidine aza-analogues: 5-azacytidine and 2′-deoxy-5-azacytidine in aqueous solution
    Chang, Xue-Ping
    Fan, Feng-Ran
    Zhang, Teng-Shuo
    Xie, Bin-Bin
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2023, 25 (38) : 26258 - 26269
  • [3] Anticancer Activity and DNA Binding of a Bifunctional Ru(II) Arene Aqua-Complex with the 2,4-Diamino-6-(2-pyridyI)-1,3,5-triazine Ligand
    Busto, Natalia
    Valladolid, Jesus
    Martinez-Alonso, Marta
    Lozano, Hector J.
    Jalon, Felix A.
    Manzano, Blanca R.
    Rodriguez, A. M.
    Carmen Carrion, M.
    Biver, Tarita
    Leal, Jose M.
    Espino, Gustavo
    Garcia, Begona
    INORGANIC CHEMISTRY, 2013, 52 (17) : 9962 - 9974
  • [4] Synthesis of poly(2-vinyl-4,6-diamino-1,3,5-triazine) nanoparticles by semi-continuous precipitation polymerization, characterization and application to bovine hemoglobin adsorption
    Xie, Xun
    Huang, Lei
    Liu, Zuifang
    Xie, Weihong
    Wang, Xiatao
    REACTIVE & FUNCTIONAL POLYMERS, 2019, 141 : 58 - 67
  • [5] New Palladium(II), Platinum(II) and Silver(I) complexes of 2-amino-4,6-dithio-1,3,5-triazine; synthesis, characterization and DNA binding properties
    Ismail, Amany M.
    El Sayed, Shadia A.
    Butler, Ian S.
    Mostafa, Sahar, I
    JOURNAL OF MOLECULAR STRUCTURE, 2020, 1200
  • [6] Quantum mechanics/molecular mechanics studies on mechanistic photophysics of epigenetic C5-halogenated DNA nucleosides: 2′-deoxy-5-chlorocytidine and 2′-deoxy-5-bromocytidine in aqueous solution
    Chang, Xue-Ping
    Fan, Feng-Ran
    Liu, Ke
    Lv, Hai-Ting
    Zhao, Geng
    Zheng, Lingyun
    Zhang, Teng-Shuo
    Xie, Bin-Bin
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2025, 27 (14) : 7139 - 7150
  • [7] Robust MeO2MA/vinyl-4,6-diamino-1,3,5-triazine copolymer hydrogels-mediated reverse gene transfection and thermo-induced cell detachment
    Tang, Lei
    Yang, Yang
    Bai, Tao
    Liu, Wenguang
    BIOMATERIALS, 2011, 32 (07) : 1943 - 1949
  • [8] Synthesis, crystal structures and DNA/human serum albumin binding of ternary Cu(II) complexes containing amino acids and 6-(pyrazin-2-yl)-1,3,5-triazine-2,4-diamino
    Zhang, Chun-Lian
    Zhang, Xue-Mei
    Liu, Wei
    Chen, Shi
    Mao, Zong-Wan
    Le, Xue-Yi
    APPLIED ORGANOMETALLIC CHEMISTRY, 2018, 32 (02)