Salinity Stress Tolerance in Solanaceous Crops: Current Understanding and Its Prospects in Genome Editing

被引:11
作者
Altaf, Muhammad Ahsan [1 ]
Mandal, Sayanti [2 ,10 ]
Behera, Biswaranjan [3 ]
Mangal, Vikas [4 ]
Naz, Safina [5 ]
Kumar, Ravinder [4 ]
Kumar, Awadhesh [6 ]
Ghorai, Mimosa [7 ]
Singh, Brajesh [4 ]
Dey, Abhijit [7 ]
Tiwari, Rahul Kumar [4 ,8 ]
Lal, Milan Kumar [4 ,8 ]
Aftab, Tariq [9 ]
机构
[1] Hainan Univ, Coll Hort, Haikou, Peoples R China
[2] Savitribai Phule Pune Univ, Inst Bioinformat & Biotechnol, Ganeshkhind Rd, Pune, Maharashtra, India
[3] ICAR Indian Inst Water Management, Bhubaneswar, Odisha, India
[4] ICAR Cent Potato Res Insitute, Shimla 171001, Himachal Prades, India
[5] Bahauddin Zakariya Univ, Dept Hort, Multan, Pakistan
[6] ICAR Natl Rice Res Inst, Cuttack, Odisha, India
[7] Presidency Univ, Dept Life Sci, 86-1 Coll St, Kolkata 700073, West Bengal, India
[8] ICAR Indian Agr Res Inst, New Delhi, India
[9] Aligarh Muslim Univ, Dept Bot, Aligarh, India
[10] Dr DY Patil Arts Commerce & Sci Coll, Dept Biotechnol, Pune, Maharashtra, India
关键词
Salinity stress; Solanaceous crops; Genetic engineering; Crop improvement; CRISPR; Cas system; POTATO SOLANUM-TUBEROSUM; TARGETED MUTAGENESIS; TETRAPLOID POTATO; SALT STRESS; GENE-EXPRESSION; TOMATO; CRISPR/CAS; IDENTIFICATION; IMPROVEMENT; ENZYMES;
D O I
10.1007/s00344-022-10890-0
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Solanaceous crops are the largest family of crops which is consumed as a vegetable for their nutritional properties such as carbohydrates, resistant starch, antioxidants, vitamins, mineral and nutrient that is beneficial for human health. Among abiotic stresses, salinity is one of the detrimental and prominent stress in the recent scenario of climate change which significantly affects the growth and development of solanaceous crops. Advances in genome editing (GE) has been employed to modify gene of several agronomically important plants. GE with CRISPR/Cas9 (Clustered Regularly Interspaced Short Palindromic Repeats and CRISPR-associated protein 9) -based techniques allow for the precise and targeted mutations, opening up the new possibility of using this tool to improve important agronomic and physiological traits. According to this review, the present landscape of CRISPR/Cas9 uses in solanaceous crops, such as tomatoes (Solanum lycopersicum) and potatoes (S. tuberosum), has been evaluated. The available literature pertaining to CRISPR/Cas in solanaceous crops hints towards its wider applicability in developing plant tolerant to abiotic stress, especially salinity stress. Therefore, together with advancements in genome and transcriptome sequencing, genomic engineering with CRISPR/Cas9 will aide in the development of salt-tolerant solanaceous crops.
引用
收藏
页码:4020 / 4036
页数:17
相关论文
共 106 条
[71]   Soil salinity: A serious environmental issue and plant growth promoting bacteria as one of the tools for its alleviation [J].
Shrivastava, Pooja ;
Kumar, Rajesh .
SAUDI JOURNAL OF BIOLOGICAL SCIENCES, 2015, 22 (02) :123-131
[72]   Precise genome modification in the crop species Zea mays using zinc-finger nucleases [J].
Shukla, Vipula K. ;
Doyon, Yannick ;
Miller, Jeffrey C. ;
DeKelver, Russell C. ;
Moehle, Erica A. ;
Worden, Sarah E. ;
Mitchell, Jon C. ;
Arnold, Nicole L. ;
Gopalan, Sunita ;
Meng, Xiangdong ;
Choi, Vivian M. ;
Rock, Jeremy M. ;
Wu, Ying-Ying ;
Katibah, George E. ;
Zhifang, Gao ;
McCaskill, David ;
Simpson, Matthew A. ;
Blakeslee, Beth ;
Greenwalt, Scott A. ;
Butler, Holly J. ;
Hinkley, Sarah J. ;
Zhang, Lei ;
Rebar, Edward J. ;
Gregory, Philip D. ;
Urnov, Fyodor D. .
NATURE, 2009, 459 (7245) :437-U156
[73]   Variation in the flowering gene SELF PRUNING 5G promotes day-neutrality and early yield in tomato [J].
Soyk, Sebastian ;
Mueller, Niels A. ;
Park, Soon Ju ;
Schmalenbach, Inga ;
Jiang, Ke ;
Hayama, Ryosuke ;
Zhang, Lei ;
Van Eck, Joyce ;
Jimenez-Gomez, Jose M. ;
Lippman, Zachary B. .
NATURE GENETICS, 2017, 49 (01) :162-168
[74]   Global plant-responding mechanisms to salt stress: physiological and molecular levels and implications in biotechnology [J].
Tang, Xiaoli ;
Mu, Xingmin ;
Shao, Hongbo ;
Wang, Hongyan ;
Brestic, Marian .
CRITICAL REVIEWS IN BIOTECHNOLOGY, 2015, 35 (04) :425-437
[75]   Genome sequence analysis provides insights on genomic variation and late blight resistance genes in potato somatic hybrid (parents and progeny) [J].
Tiwari, Jagesh Kumar ;
Rawat, Shashi ;
Luthra, Satish K. ;
Zinta, Rasna ;
Sahu, Sarika ;
Varshney, Shivangi ;
Kumar, Vinod ;
Dalamu, Dalamu ;
Mandadi, Nagesh ;
Kumar, Manoj ;
Chakrabarti, Swarup K. ;
Rao, Atmakuri R. ;
Rai, Anil .
MOLECULAR BIOLOGY REPORTS, 2021, 48 (01) :623-635
[76]   High-frequency modification of plant genes using engineered zinc-finger nucleases [J].
Townsend, Jeffrey A. ;
Wright, David A. ;
Winfrey, Ronnie J. ;
Fu, Fengli ;
Maeder, Morgan L. ;
Joung, J. Keith ;
Voytas, Daniel F. .
NATURE, 2009, 459 (7245) :442-U161
[77]   CRISPR/Cas9-based precise excision of SlHyPRP1 domain(s) to obtain salt stress-tolerant tomato [J].
Tran, Mil Thi ;
Doan, Duong Thi Hai ;
Kim, Jihae ;
Song, Young Jong ;
Sung, Yeon Woo ;
Das, Swati ;
Kim, Eun-Jung ;
Son, Geon Hui ;
Kim, Sang Hee ;
Van Vu, Tien ;
Kim, Jae-Yean .
PLANT CELL REPORTS, 2021, 40 (06) :999-1011
[78]   Cas9-mediated mutagenesis of potato starch-branching enzymes generates a range of tuber starch phenotypes [J].
Tuncel, Aytug ;
Corbin, Kendall R. ;
Ahn-Jarvis, Jennifer ;
Harris, Suzanne ;
Hawkins, Erica ;
Smedley, Mark A. ;
Harwood, Wendy ;
Warren, Frederick J. ;
Patron, Nicola J. ;
Smith, Alison M. .
PLANT BIOTECHNOLOGY JOURNAL, 2019, 17 (12) :2259-2271
[79]   CRISPR-Cas9 system: A genome-editing tool with endless possibilities [J].
Tyagi, Swati ;
Kumar, Robin ;
Das, Aparup ;
Won, So Youn ;
Shukla, Pratyoosh .
JOURNAL OF BIOTECHNOLOGY, 2020, 319 :36-53
[80]   Rapid breeding of parthenocarpic tomato plants using CRISPR/Cas9 [J].
Ueta, Risa ;
Abe, Chihiro ;
Watanabe, Takahito ;
Sugano, Shigeo S. ;
Ishihara, Ryosuke ;
Ezura, Hiroshi ;
Osakabe, Yuriko ;
Osakabe, Keishi .
SCIENTIFIC REPORTS, 2017, 7