Combating Antimicrobial Resistance in the Post-Genomic Era: Rapid Antibiotic Discovery

被引:6
作者
Yang, Yuehan [1 ,2 ]
Kessler, Mara Grace C. [2 ,3 ]
Marchan-Rivadeneira, Maria Raquel [1 ,2 ,4 ,5 ]
Han, Yong [1 ,2 ,6 ]
机构
[1] Ohio Univ, Translat Biomed Sci Program, Athens, OH 45701 USA
[2] Ohio Univ, Edison Biotechnol Inst, Athens, OH 45701 USA
[3] Ohio Univ, Honors Tutorial Coll, Athens, OH 45701 USA
[4] Ohio Univ, Dept Biol Sci, Athens, OH 45701 USA
[5] Pontificia Univ Catolica Ecuador PUCE, Ctr Res Hlth Latinamer CISeAL, Biol Sci Dept, Quito 170143, Ecuador
[6] Ohio Univ, Dept Chem & Biochem, Athens, OH 45701 USA
关键词
antimicrobial resistance; genome mining; natural products; antibiotics; biosynthesis gene clusters; BIOSYNTHETIC GENE-CLUSTER; NATURAL-PRODUCT; RIMINOPHENAZINE DERIVATIVES; HALOGENATED PHENAZINES; STRUCTURE ELUCIDATION; POLYKETIDE SYNTHASE; MODE; RIFAMPICIN; REVEALS; PEPTIDE;
D O I
10.3390/molecules28104183
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Constantly evolving drug-resistant "superbugs" have caused an urgent demand for novel antimicrobial agents. Natural products and their analogs have been a prolific source of antimicrobial agents, even though a high rediscovery rate and less targeted research has made the field challenging in the pre-genomic era. With recent advancements in technology, natural product research is gaining new life. Genome mining has allowed for more targeted excavation of biosynthetic potential from natural sources that was previously overlooked. Researchers use bioinformatic algorithms to rapidly identify and predict antimicrobial candidates by studying the genome before even entering the lab. In addition, synthetic biology and advanced analytical instruments enable the accelerated identification of novel antibiotics with distinct structures. Here, we reviewed the literature for noteworthy examples of novel antimicrobial agents discovered through various methodologies, highlighting the candidates with potent effectiveness against antimicrobial-resistant pathogens.
引用
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页数:26
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共 120 条
[41]   Heterologous expression of natural product biosynthetic gene clusters in Streptomyces coelicolor: from genome mining to manipulation of biosynthetic pathways [J].
Gomez-Escribano, Juan Pablo ;
Bibb, Mervyn J. .
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY, 2014, 41 (02) :425-431
[42]   Discovery of Unique Lanthionine Synthetases Reveals New Mechanistic and Evolutionary Insights [J].
Goto, Yuki ;
Li, Bo ;
Claesen, Jan ;
Shi, Yanxiang ;
Bibb, Mervyn J. ;
van der Donk, Wilfred A. .
PLOS BIOLOGY, 2010, 8 (03)
[43]   Design and Biosynthesis of Dimeric Alboflavusins with Biaryl Linkages via Regiospecific C-C Bond Coupling [J].
Guo, Zhengyan ;
Li, Pengwei ;
Chen, Guozhu ;
Li, Chao ;
Cao, Zhenju ;
Zhang, Yuwei ;
Ren, Jinwei ;
Xiang, Hua ;
Lin, Shuangjun ;
Ju, Jianhua ;
Chen, Yihua .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2018, 140 (51) :18009-18015
[44]   Recent developments in the isolation, biological function, biosynthesis, and synthesis of phenazine natural products [J].
Guttenberger, Nikolaus ;
Blankenfeldt, Wulf ;
Breinbauer, Rolf .
BIOORGANIC & MEDICINAL CHEMISTRY, 2017, 25 (22) :6149-6166
[45]   Indole-Induced Reversion of Intrinsic Multiantibiotic Resistance in Lysobacter enzymogenes [J].
Han, Yong ;
Wang, Yan ;
Yu, Yameng ;
Chen, Haotong ;
Shen, Yuemao ;
Du, Liangcheng .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2017, 83 (17)
[46]   FR290581, a novel sordarin derivative: Synthesis and antifungal activity [J].
Hanadate, Tadaatsu ;
Tomishima, Masaki ;
Shiraishi, Nobuyuki ;
Tanabe, Daisuke ;
Morikawa, Hiroshi ;
Barrett, David ;
Matsumoto, Satoru ;
Ohtomo, Kazumi ;
Maki, Katsuyuki .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2009, 19 (05) :1465-1468
[47]   NMR of Natural Products as Potential Drugs [J].
Hansen, Poul Erik .
MOLECULES, 2021, 26 (12)
[48]   Genomics-Guided Discovery of Endophenazines from Kitasatospora sp HKI 714 [J].
Heine, Daniel ;
Martin, Karin ;
Hertweck, Christian .
JOURNAL OF NATURAL PRODUCTS, 2014, 77 (04) :1083-1087
[49]   Recent advances in genome-based polyketide discovery [J].
Helfrich, Eric J. N. ;
Reiter, Silke ;
Piel, Joern .
CURRENT OPINION IN BIOTECHNOLOGY, 2014, 29 :107-115
[50]   Anthracimycin activity against contemporary methicillin-resistant Staphylococcus aureus [J].
Hensler, Mary E. ;
Jang, Kyoung Hwa ;
Thienphrapa, Wdee ;
Vuong, Lisa ;
Tran, Dan N. ;
Soubih, Evaristus ;
Lin, Leo ;
Haste, Nina M. ;
Cunningham, Mark L. ;
Kwan, Bryan P. ;
Shaw, Karen Joy ;
Fenical, William ;
Nizet, Victor .
JOURNAL OF ANTIBIOTICS, 2014, 67 (08) :549-553