Association analysis for SNPs of BAAT and COL1A1 genes with cashmere production performance and other production traits in Liaoning cashmere goats

被引:8
作者
Cai, Weidong [1 ]
Xu, Yanan [1 ]
Bai, Zhixian [1 ]
Lin, Guangyu [2 ]
Wang, Lingling [2 ]
Dou, Xingtang [2 ]
Han, Di [2 ]
Wang, Zhanhong [2 ]
Wang, Jiaming [2 ]
Zhang, Xinjiang [1 ]
Zhang, Yu [1 ]
Qin, Yuting [1 ]
Gu, Ming [1 ]
Sun, Yinggang [1 ]
Wu, Yanzhi [1 ]
Chen, Rui [1 ]
Wang, Zeying [1 ]
机构
[1] Shenyang Agr Univ, Coll Anim Sci & Vet Med, Shenyang 110866, Peoples R China
[2] Liaoning Prov Modern Agr Prod Base Construct Engn, Shenyang, Peoples R China
关键词
Cashmere fineness; milk fat rate; chest girth; BAAT; IN-VITRO; GROWTH; IDENTIFICATION; PROLACTIN; POLYMORPHISM; EXPRESSION; PARAMETERS; INFECTION; HAPLOTYPE; HOLSTEIN;
D O I
10.1080/10495398.2022.2088550
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
This study aimed to investigate the relationship between the polymorphism of bile acid-CoA: amino acid N-acyltransferase (BAAT) and collagen type I alpha 1 chain (COL1A1) genes and the production performance of Liaoning Cashmere goat (LCG). The potential single nucleotide polymorphisms (SNPs) of LCG were detected by sequence comparison of BAAT and COL1A1 genes and PCR-Seq polymorphism, and the effect of SNPs on production performance was analyzed by SPSS software. The results showed that three SNPs loci were detected in BAAT gene: G7900A, T7967C, C7998T, and one SNP locus T6716C was detected in COL1AL gene. At G7900A locus, the dominant genotype for cashmere performance was GG, and the dominant genotype for body measurement traits and milk production traits was AG. At T7967C locus, the dominant genotype for cashmere performance was TT, and the dominant genotype for body measurement traits and milk production traits was CC. At C7998T locus, TT was the dominant genotype for cashmere performance, body measurement traits, and milk production traits. At the T6716C locus, TT was the dominant genotype for cashmere performance, body measurement traits, and milk production traits. H1H1: AACC is the dominant haplotype combination. Therefore, this study will provide a reliable reference for future research on cashmere production performance, body measurement traits, and milk production traits of LCG.
引用
收藏
页码:2324 / 2335
页数:12
相关论文
共 54 条
[1]   A directed search around caprine candidate loci provided evidence for microsatellites linkage to growth and cashmere yield in Rayini goats [J].
Abadi, M. R. Mohammad ;
Askari, N. ;
Baghizadeh, A. ;
Esmailizadeh, A. K. .
SMALL RUMINANT RESEARCH, 2009, 81 (2-3) :146-151
[2]  
[Anonymous], 2000, BIOTECH SOFTW INTERN, DOI DOI 10.1089/152791600459894
[3]   Molecular characterization of HOXC8 gene and methylation status analysis of its exon 1 associated with the length of cashmere fiber in Liaoning cashmere goat [J].
Bai, Wen L. ;
Wang, Jiao J. ;
Yin, Rong H. ;
Dang, Yun L. ;
Wang, Ze Y. ;
Zhu, Yu B. ;
Cong, Yu Y. ;
Deng, Liang ;
Guo, Dan ;
Wang, Shi Q. ;
Yang, Shu H. ;
Xue, Hui L. .
GENETICA, 2017, 145 (01) :115-126
[4]   Whole genome comparative analysis of CpG islands in camelid and other mammalian genomes [J].
Barazandeh, Arsalan ;
Mohammadabadi, Mohammadreza ;
Ghaderi-Zefrehei, Mostafa ;
Rafeie, Farjad ;
Imumorin, Ikhide G. .
MAMMALIAN BIOLOGY, 2019, 98 (1) :73-79
[5]   Estimating non-genetic and genetic parameters of pre-weaning growth traits in Raini Cashmere goat [J].
Barazandeh, Arsalan ;
Moghbeli, Sadrollah Molaei ;
Vatankhah, Mahmood ;
Mohammadabadi, Mohammadreza .
TROPICAL ANIMAL HEALTH AND PRODUCTION, 2012, 44 (04) :811-817
[6]   Mannose-binding lectin haplotypes influence Brucella abortus infection in the water buffalo (Bubalus bubalis) [J].
Capparelli, R. ;
Parlato, M. ;
Amoroso, M. G. ;
Roperto, S. ;
Marabelli, R. ;
Roperto, F. ;
Iannelli, D. .
IMMUNOGENETICS, 2008, 60 (3-4) :157-165
[7]   Complex inheritance of familial hypercholanemia with associated mutations in TJP2 and BAAT [J].
Carlton, VEH ;
Harris, BZ ;
Puffenberger, EG ;
Batta, AK ;
Knisely, AS ;
Robinson, DL ;
Strauss, KA ;
Schneider, BL ;
Lim, WA ;
Salen, G ;
Morton, DH ;
Bull, LN .
NATURE GENETICS, 2003, 34 (01) :91-96
[8]   The Overexpression of Tβ4 in the Hair Follicle Tissue of Alpas Cashmere Goats Increases Cashmere Yield and Promotes Hair Follicle Development [J].
Dai, Bai ;
Liang, Hao ;
Guo, Dong-dong ;
Bi, Zhao-wei ;
Yuan, Jian-long ;
Jin, Yong ;
Huan, Lei ;
Guo, Xu-dong ;
Cang, Ming ;
Liu, Dong-jun .
ANIMALS, 2020, 10 (01)
[9]   Genome Array on Differentially Expressed Genes of Skin Tissue in Cashmere Goat at Early Anagen of Cashmere Growth Cycle Using DNA Microarray [J].
Di Jiang ;
Xu Xin-ming ;
Ainiwaer, Lazate ;
Zhang Yan-hua ;
Tian Ke-chuan ;
Yu Li-juan ;
Wu Wei-wei ;
Tulafu, Hanikezi ;
Fu Xue-feng ;
Yasen, Marzeya .
JOURNAL OF INTEGRATIVE AGRICULTURE, 2014, 13 (10) :2243-2252
[10]   Genetic analysis of case/control data using estimated haplotype frequencies: Application to APOE locus variation and Alzheimer's disease [J].
Fallin, D ;
Cohen, A ;
Essioux, L ;
Chumakov, I ;
Blumenfeld, M ;
Cohen, D ;
Schork, NJ .
GENOME RESEARCH, 2001, 11 (01) :143-151