Exploring the current landscape of single-cell RNA sequencing applications in gastric cancer research

被引:1
|
作者
Awuah, Wireko Andrew [1 ]
Roy, Sakshi [2 ,9 ]
Tan, Joecelyn Kirani [3 ]
Adebusoye, Favour Tope [1 ]
Qiang, Zekai [4 ]
Ferreira, Tomas [5 ]
Ahluwalia, Arjun [2 ]
Shet, Vallabh [6 ]
Yee, Amanda Leong Weng [7 ]
Abdul-Rahman, Toufik [1 ]
Papadakis, Marios [8 ]
机构
[1] Sumy State Univ, Fac Med, Sumy, Ukraine
[2] Queens Univ Belfast, Sch Med, Belfast, North Ireland
[3] Univ St Andrews, Fac Med, St Andrews, Scotland
[4] Univ Sheffield, Dept Oncol & Metab, Sheffield, England
[5] Univ Cambridge, Sch Clin Med, Dept Clin Neurosci, Cambridge, England
[6] Bangalore Med Coll & Res Inst, Fac Med, Bangalore, Karnataka, India
[7] Univ Malaya, Fac Med, Kuala Lumpur, Malaysia
[8] Univ Witten Herdecke, Univ Hosp Witten Herdecke, Dept Surg 2, Wuppertal, Germany
[9] Queens Univ Belfast, Sch Med, 97 Lisburn Rd, Belfast BT9 7BL, North Ireland
关键词
gastric cancer; gene expression profiling; medical oncology; molecular medicine; scRNA-seq; single-cell RNA sequencing; therapeutic targets; tumour heterogeneity; tumour microenvironment; SEQ; REVEALS;
D O I
10.1111/jcmm.18159
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Gastric cancer (GC) represents a major global health burden and is responsible for a significant number of cancer-related fatalities. Its complex nature, characterized by heterogeneity and aggressive behaviour, poses considerable challenges for effective diagnosis and treatment. Single-cell RNA sequencing (scRNA-seq) has emerged as an important technique, offering unprecedented precision and depth in gene expression profiling at the cellular level. By facilitating the identification of distinct cell populations, rare cells and dynamic transcriptional changes within GC, scRNA-seq has yielded valuable insights into tumour progression and potential therapeutic targets. Moreover, this technology has significantly improved our comprehension of the tumour microenvironment (TME) and its intricate interplay with immune cells, thereby opening avenues for targeted therapeutic strategies. Nonetheless, certain obstacles, including tumour heterogeneity and technical limitations, persist in the field. Current endeavours are dedicated to refining protocols and computational tools to surmount these challenges. In this narrative review, we explore the significance of scRNA-seq in GC, emphasizing its advantages, challenges and potential applications in unravelling tumour heterogeneity and identifying promising therapeutic targets. Additionally, we discuss recent developments, ongoing efforts to overcome these challenges, and future prospects. Although further enhancements are required, scRNA-seq has already provided valuable insights into GC and holds promise for advancing biomedical research and clinical practice.
引用
收藏
页数:13
相关论文
共 50 条
  • [31] Unraveling the landscape of non-melanoma skin cancer through single-cell RNA sequencing technology
    Yan, Guorong
    Wang, Xiuli
    Zhang, Guolong
    FRONTIERS IN ONCOLOGY, 2024, 14
  • [32] Single-cell RNA Sequencing in Immunology
    Cao, Yirui
    Qiu, Yue
    Tu, Guowei
    Yang, Cheng
    CURRENT GENOMICS, 2020, 21 (08) : 564 - 575
  • [33] Systematic review on the current knowledge and use of single-cell RNA sequencing in head and neck cancer
    Stampe, Helene
    Jakobsen, Kathrine Kronberg
    Bendtsen, Simone Kloch
    Gronhoj, Christian
    von Buchwald, Christian
    APMIS, 2021, 129 (11) : 619 - 625
  • [34] Applications of single-cell RNA sequencing in rheumatoid arthritis
    Figueiredo, Marxa L.
    FRONTIERS IN IMMUNOLOGY, 2024, 15
  • [35] The Applications of Single-Cell RNA Sequencing in Atherosclerotic Disease
    Slenders, Lotte
    Tessels, Danielle E.
    van der Laan, Sander W.
    Pasterkamp, Gerard
    Mokry, Michal
    FRONTIERS IN CARDIOVASCULAR MEDICINE, 2022, 9
  • [36] New insights into cancer immune checkpoints landscape from single-cell RNA sequencing
    Wang, Qian
    He, Jiahui
    Lei, Tianyu
    Li, Xiaohui
    Yue, Shengqin
    Liu, Chao
    Hu, Qinyong
    BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER, 2025, 1880 (03):
  • [37] Microfluidics Facilitates the Development of Single-Cell RNA Sequencing
    Pan, Yating
    Cao, Wenjian
    Mu, Ying
    Zhu, Qiangyuan
    BIOSENSORS-BASEL, 2022, 12 (07):
  • [38] Progress of Single-Cell RNA Sequencing Technology in Myocardial Infarction Research
    Li, Lanfang
    Wang, Min
    Ma, Qiuxiao
    Li, Yunxiu
    Ye, Jingxue
    Sun, Xiaobo
    Sun, Guibo
    FRONTIERS IN CARDIOVASCULAR MEDICINE, 2022, 9
  • [39] Single-cell RNA Sequencing Demonstrates the Heterogeneity of Different Molecular Subtypes in Gastric Cancer
    Ren, Ming
    Ma, Hongyan
    Guo, Lijia
    Liu, Yuqing
    Wang, Li
    Wei, Shaoting
    BIOCHEMICAL GENETICS, 2024,
  • [40] Single-cell sequencing and its applications in head and neck cancer
    Qi, Zongtai
    Barrett, Thomas
    Parikh, Anuraag S.
    Tirosh, Itay
    Puram, Sidharth V.
    ORAL ONCOLOGY, 2019, 99