A fully integrated duplex RT-LAMP device for the detection of viral infections

被引:2
作者
Mytzka, Nicolas [1 ]
Arbaciauskaite, Skaiste [1 ,2 ]
Sandetskaya, Natalia [1 ]
Mattern, Kai [1 ]
Kuhlmeier, Dirk [1 ]
机构
[1] Fraunhofer Inst Cell Therapy & Immunol, MicroDiagnost Unit, D-04103 Leipzig, Germany
[2] Charite Univ Med Berlin, Inst Cell Biol & Neurobiol, Charitepl 1, D-10117 Berlin, Germany
关键词
SARS-CoV-2; Influenza; Coronavirus; Respiratory infections; Point-of-care; RT-LAMP; Multiplex; ISOTHERMAL AMPLIFICATION LAMP; INFLUENZA-A; SARS-COV-2; PCR;
D O I
10.1007/s10544-023-00676-w
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Respiratory viruses can cause epidemics or pandemics, which are worldwide outbreaks of disease. The severity of these events varies depending on the virus, its characteristics, along with environmental factors. The frequency of epidemics and pandemics caused by respiratory viruses is difficult to predict, but the potential severity of such events underlines the importance of continued monitoring, research, and preparation for emerging infectious diseases. To help improve pandemic preparedness, we created a fully integrated duplex reverse transcription loop-mediated isothermal amplification (RT-LAMP) device targeting two respiratory viruses, influenza A/X-31 virus and bovine coronavirus, as a replacement for SARS-CoV-2. This device can be adapted to any other respiratory virus. In this study, we showed and evaluated a prototype of a microfluidic system, and showed that duplex RT-LAMP can detect and distinguish between the two viruses, with LoDs of 2,000 copies/ml for bovine coronavirus and 200 copies/ml for influenza A/X-31 virus.
引用
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页数:9
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共 40 条
[1]   Comparative Review of SARS-CoV-2, SARS-CoV, MERS-CoV, and Influenza A Respiratory Viruses [J].
Abdelrahman, Zeinab ;
Li, Mengyuan ;
Wang, Xiaosheng .
FRONTIERS IN IMMUNOLOGY, 2020, 11
[2]   Rapid and simple colorimetric detection of multiple influenza viruses infecting humans using a reverse transcriptional loop-mediated isothermal amplification (RT-LAMP) diagnostic platform [J].
Ahn, Su Jeong ;
Baek, Yun Hee ;
Lloren, Khristine Kaith S. ;
Choi, Won-Suk ;
Jeong, Ju Hwan ;
Antigua, Khristine Joy C. ;
Kwon, Hyeok-il ;
Park, Su-Jin ;
Kim, Eun-Ha ;
Kim, Young-il ;
Si, Young-Jae ;
Hong, Seung Bok ;
Shin, Kyeong Seob ;
Chun, Sungkun ;
Choi, Young Ki ;
Song, Min-Suk .
BMC INFECTIOUS DISEASES, 2019, 19 (1)
[3]   Comparison of four multiplex PCR assays for the detection of viral pathogens in respiratory specimens [J].
Anderson, Trevor P. ;
Werno, Anja M. ;
Barratt, Kevin ;
Mahagamasekera, Patalee ;
Murdoch, David R. ;
Jennings, Lance C. .
JOURNAL OF VIROLOGICAL METHODS, 2013, 191 (02) :118-121
[4]  
[Anonymous], 2022, Joint statement: Working together towards COVID-19 and seasonal influenza vaccinations for this winter
[5]   Self-Sampled Gargle Water Direct RT-LAMP as a Screening Method for the Detection of SARS-CoV-2 Infections [J].
Arbaciauskaite, Skaiste ;
Babakhani, Pouya ;
Sandetskaya, Natalia ;
Vitkus, Dalius ;
Jancoriene, Ligita ;
Karosiene, Dovile ;
Karciauskaite, Dovile ;
Zablockiene, Birute ;
Kuhlmeier, Dirk .
DIAGNOSTICS, 2022, 12 (04)
[6]   Seasonality, Timing, and Climate Drivers of Influenza Activity Worldwide [J].
Baumgartner, Eduardo Azziz ;
Dao, Christine N. ;
Nasreen, Sharifa ;
Bhuiyan, Mejbah Uddin ;
Mah-E-Muneer, Syeda ;
Al Mamun, Abdullah ;
Sharker, M. A. Yushuf ;
Zaman, Rashid Uz ;
Cheng, Po-Yung ;
Klimov, Alexander I. ;
Widdowson, Marc-Alain ;
Uyeki, Timothy M. ;
Luby, Stephen P. ;
Mounts, Anthony ;
Bresee, Joseph .
JOURNAL OF INFECTIOUS DISEASES, 2012, 206 (06) :838-846
[7]   Loop-mediated isothermal amplification (LAMP) - review and classification of methods for sequence-specific detection [J].
Becherer, Lisa ;
Borst, Nadine ;
Bakheit, Mohammed ;
Frischmann, Sieghard ;
Zengerle, Roland ;
von Stetten, Felix .
ANALYTICAL METHODS, 2020, 12 (06) :717-746
[8]   Estimates of the reproduction number for seasonal, pandemic, and zoonotic influenza: a systematic review of the literature [J].
Biggerstaff, Matthew ;
Cauchemez, Simon ;
Reed, Carrie ;
Gambhir, Manoj ;
Finelli, Lyn .
BMC INFECTIOUS DISEASES, 2014, 14
[9]   Cost-of-illness comparison between clinical judgment and molecular point-of-care testing for influenza-like illness patients in Germany [J].
Brachmann, M. ;
Serwa, P. ;
Sauerland, D. .
NPJ PRIMARY CARE RESPIRATORY MEDICINE, 2023, 33 (01)
[10]   Transmission of influenza: Implications for control in health care settings [J].
Bridges, CB ;
Kuehnert, MJ ;
Hall, CB .
CLINICAL INFECTIOUS DISEASES, 2003, 37 (08) :1094-1101