Deep learning in drug discovery: a futuristic modality to materialize the large datasets for cheminformatics

被引:6
作者
Raza, Ali [1 ,2 ]
Chohan, Talha Ali [2 ,3 ]
Buabeid, Manal [4 ]
Arafa, El-Shaima A. [4 ,5 ]
Chohan, Tahir Ali [3 ]
Fatima, Batool [6 ]
Sultana, Kishwar [1 ]
Ullah, Malik Saad [7 ]
Murtaza, Ghulam [8 ]
机构
[1] Univ Lahore, Fac Pharm, Dept Pharmaceut Chem, Lahore, Pakistan
[2] Univ Lahore, Inst Mol Biol & Biochem, Lahore 5400, Pakistan
[3] UVAS, Inst Pharmaceut Sci, Lahore, Pakistan
[4] Ajman Univ, Coll Pharm & Hlth Sci, Dept Clin Sci, Ajman, U Arab Emirates
[5] Ajman Univ, Ctr Med & Bioallied Hlth Sci Res, Ajman, U Arab Emirates
[6] Bahauddin Zakariya Univ, Dept Biochem, Multan, Pakistan
[7] Govt Coll Univ, Dept Pharm, Faisalabad, Pakistan
[8] COMSATS Univ Islamabad, Dept Pharm, Lahore Campus, Lahore, Pakistan
关键词
Drug discovery; artificial intelligence; deep learning; deep learning algorithms; database; drug design; SARS-CoV-2; SMILES format; AQUEOUS SOLUBILITY; ARTIFICIAL-INTELLIGENCE; PREDICTION; CLASSIFICATION; DESIGN; MODEL; QSAR; INHIBITORS; REGRESSION; CLEARANCE;
D O I
10.1080/07391102.2022.2136244
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Artificial intelligence (AI) development imitates the workings of the human brain to comprehend modern problems. The traditional approaches such as high throughput screening (HTS) and combinatorial chemistry are lengthy and expensive to the pharmaceutical industry as they can only handle a smaller dataset. Deep learning (DL) is a sophisticated AI method that uses a thorough comprehension of particular systems. The pharmaceutical industry is now adopting DL techniques to enhance the research and development process. Multi-oriented algorithms play a crucial role in the processing of QSAR analysis, de novo drug design, ADME evaluation, physicochemical analysis, preclinical development, followed by clinical trial data precision. In this study, we investigated the performance of several algorithms, including deep neural networks (DNN), convolutional neural networks (CNN) and multi-task learning (MTL), with the aim of generating high-quality, interpretable big and diverse databases for drug design and development. Studies have demonstrated that CNN, recurrent neural network and deep belief network are compatible, accurate and effective for the molecular description of pharmacodynamic properties. In Covid-19, existing pharmacological compounds has also been repurposed using DL models. In the absence of the Covid-19 vaccine, remdesivir and oseltamivir have been widely employed to treat severe SARS-CoV-2 infections. In conclusion, the results indicate the potential benefits of employing the DL strategies in the drug discovery process. Communicated by Ramaswamy H. Sarma
引用
收藏
页码:9177 / 9192
页数:16
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