Frequently mutated genes in predicting the relapse of stage I lung adenocarcinoma

被引:2
作者
Rao, Wen [1 ,2 ,3 ]
Yang, Lujie [1 ,2 ]
Dai, Nan [1 ,2 ]
Zhang, Liang [1 ,2 ]
Liu, Jie [1 ,2 ]
Yang, Bo [1 ,2 ]
Li, Mengxia [1 ,2 ]
Shan, Jinlu [1 ,2 ]
Wang, Qiushi [4 ,5 ]
Wang, Dong [1 ,2 ]
机构
[1] Army Med Univ, Daping Hosp, Canc Ctr, 10 Changjiangzhi Rd, Chongqing, Peoples R China
[2] Army Med Univ, Army Med Ctr PLA, Canc Ctr, 10 Changjiangzhi Rd, Chongqing, Peoples R China
[3] 75th Grp Army Hosp, Dali, Yunnan, Peoples R China
[4] Army Med Univ, Daping Hosp, Dept Pathol, Chongqing, Peoples R China
[5] Army Med Univ, Army Med Ctr PLA, Chongqing, Peoples R China
基金
中国国家自然科学基金;
关键词
Stage I lung adenocarcinoma; Targeted sequencing; Relapse; Gene mutation; Immunohistochemistry; RBM10; KRAS; NONSMALL CELL LUNG; GROWTH-FACTOR RECEPTOR; PROGNOSTIC VALUE; CANCER PATIENTS; EGFR MUTATION; EXPRESSION; SURVIVAL; P53; KRAS; CHEMOTHERAPY;
D O I
10.1007/s12094-023-03074-z
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
PurposeApproximately, 45-65% stage I non-small cell lung cancer (NSCLC) patients with surgical resection relapse within 5 years. Therefore, it is urgent to identify the predictors involved in the relapse of stage I NSCLC.Methods/patientsTargeted sequencing was used to examine the mutation of tumor tissues and matched adjacent normal tissues from 35 patients with stage I lung adenocarcinoma (LUAD). Then, tissue microarrays containing tumor tissues from 149 stage I LUAD patients were used to assess protein expression of frequently mutated genes by immunohistochemistry. COX regression model was used to evaluate the impacts of frequently mutated genes and their protein expression on relapse-free survival (RFS) in stage I LUAD.Results and conclusionsThree hundred and twenty-nine non-synonymous somatic variants were identified in 161 genes among these 35 patients. EGFR, TP53, LRP1B, RBM10, KRAS, NTRK3, RB1, ALK, APC, FAT2, KEAP1, MED12 and MLL3 were described as frequently mutated genes with prevalence more than 10%. Patients harboring KRAS mutation had more relapse in 1 year after surgical resection. For the expression of these frequently mutated genes in 149 stage I patients, multivariate Cox regression analyses showed that the expression of RBM10 was positively associated with RFS in all patients (HR 0.40, 95% CI 0.15-1.0, p = 0.052), and the expression of APC was negative associated with RFS in patients with EGFR mutations (HR 3.10, 95% CI 1.54-6.26, p = 0.002). Stage I LUAD patients with KRAS mutation or low RBM10 expression are inclined to receive more positive intervention rather than just disease surveillance.
引用
收藏
页码:1767 / 1778
页数:12
相关论文
共 49 条
[1]   Early stage NSCLC - challenges to implementing ctDNA-based screening and MRD detection [J].
Abbosh, Christopher ;
Birkbak, Nicolai J. ;
Swanton, Charles .
NATURE REVIEWS CLINICAL ONCOLOGY, 2018, 15 (09) :577-586
[3]   RBM5, 6, and 10 Differentially Regulate NUMB Alternative Splicing to Control Cancer Cell Proliferation [J].
Bechara, Elias G. ;
Sebestyen, Endre ;
Bernardis, Isabella ;
Eyras, Eduardo ;
Valcarcel, Juan .
MOLECULAR CELL, 2013, 52 (05) :720-733
[4]  
Berghmans T, 2005, ANTICANCER RES, V25, P2385
[5]   Adenomatous polyposis coli gene promoter hypermethylation in non-small cell lung cancer is associated with survival [J].
Brabender, J ;
Usadel, H ;
Danenberg, KD ;
Metzger, R ;
Schneider, PM ;
Lord, RV ;
Wickramasinghe, K ;
Lum, CE ;
Park, J ;
Salonga, D ;
Singer, J ;
Sidransky, D ;
Hölscher, AH ;
Meltzer, SJ ;
Danenberg, PV .
ONCOGENE, 2001, 20 (27) :3528-3532
[6]   DNA methylation markers and early recurrence in stage I lung cancer [J].
Brock, Malcolm V. ;
Hooker, Craig M. ;
Ota-Machida, Emi ;
Han, Yu ;
Guo, Mingzhou ;
Ames, Stephen ;
Gloeckner, Sabine ;
Piantadosi, Steven ;
Gabrielson, Edward ;
Pridham, Genevieve ;
Pelosky, Kristen ;
Belinsky, Steven A. ;
Yang, Stephen C. ;
Baylin, Stephen B. ;
Herman, James G. .
NEW ENGLAND JOURNAL OF MEDICINE, 2008, 358 (11) :1118-1128
[7]   Role of oncogenic KRAS in the diagnosis, prognosis and treatment of pancreatic cancer [J].
Buscail, Louis ;
Bournet, Barbara ;
Cordelier, Pierre .
NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY, 2020, 17 (03) :153-168
[8]   Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas [J].
Campbell, Joshua D. ;
Alexandrov, Anton ;
Kim, Jaegil ;
Wala, Jeremiah ;
Berger, Alice H. ;
Pedamallu, Chandra Sekhar ;
Shukla, Sachet A. ;
Guo, Guangwu ;
Brooks, Angela N. ;
Murray, Bradley A. ;
Imielinski, Marcin ;
Hu, Xin ;
Ling, Shiyun ;
Akbani, Rehan ;
Rosenberg, Mara ;
Cibulskis, Carrie ;
Ramachandran, Aruna ;
Collisson, Eric A. ;
Kwiatkowski, David J. ;
Lawrence, Michael S. ;
Weinstein, John N. ;
Verhaak, Roel G. W. ;
Wu, Catherine J. ;
Hammerman, Peter S. ;
Cherniack, Andrew D. ;
Getz, Gad ;
Artyomov, Maxim N. ;
Schreiber, Robert ;
Govindan, Ramaswamy ;
Meyerson, Matthew .
NATURE GENETICS, 2016, 48 (06) :607-+
[9]  
Cancer Genome Atlas Research Network, 2018, Nature, V559, pE12, DOI [10.1038/nature13385, 10.1038/s41586-018-0228-6]
[10]   Genomic landscape of lung adenocarcinoma in East Asians [J].
Chen, Jianbin ;
Yang, Hechuan ;
Teo, Audrey Su Min ;
Amer, Lidyana Bte ;
Sherbaf, Faranak Ghazi ;
Tan, Chu Quan ;
Alvarez, Jacob Josiah Santiago ;
Lu, Bingxin ;
Lim, Jia Qi ;
Takano, Angela ;
Nahar, Rahul ;
Lee, Yin Yeng ;
Phual, Cheryl Zi Jin ;
Chua, Khi Pin ;
Suteja, Lisda ;
Chen, Pauline Jieqi ;
Chang, Mei Mei ;
Koh, Tina Puay Theng ;
Ong, Boon-Hean ;
Anantham, Devanand ;
Hsu, Anne Ann Ling ;
Gogna, Apoorva ;
Too, Chow Wei ;
Aung, Zaw Win ;
Lee, Yi Fei ;
Wang, Lanying ;
Lim, Tony Kiat Hon ;
Wilm, Andreas ;
Choi, Poh Sum ;
Ng, Poh Yong ;
Toh, Chee Keong ;
Lim, Wan-Teck ;
Ma, Siming ;
Lim, Bing ;
Liu, Jin ;
Tam, Wai Leong ;
Skanderup, Anders Jacobsen ;
Yeong, Joe Poh Sheng ;
Tan, Eng-Huat ;
Creasy, Caretha L. ;
Tan, Daniel Shao Weng ;
Hillmer, Axel M. ;
Zhai, Weiwei .
NATURE GENETICS, 2020, 52 (02) :177-+