Identification and validation of novel prognostic biomarkers and therapeutic targets for non-small cell lung cancer

被引:1
|
作者
Lai, Li-Ting [1 ,2 ]
Ren, Yuan-Hui [2 ,3 ]
Huai, Ya-Jun [1 ,2 ]
Liu, Yu [2 ,3 ]
Liu, Ying [2 ,3 ]
Wang, Shan-Shan [2 ,3 ]
Mei, Jin-Hong [2 ,3 ]
机构
[1] Nanchang Univ, Dept Oncol, Affiliated Hosp 1, Nanchang, Jiangxi, Peoples R China
[2] Nanchang Univ, Dept Pathol, Affiliated Hosp 1, Nanchang, Jiangxi, Peoples R China
[3] Nanchang Univ, Inst Mol Pathol, Nanchang, Jiangxi, Peoples R China
基金
中国国家自然科学基金;
关键词
non-small cell lung cancer; gene expression omnibus; differentially expressed genes; protein-protein interaction; biological process; OVEREXPRESSION; EXPRESSION; SURVIVAL; PROLIFERATION; PROGRESSION; CARCINOMA; ANILLIN; KINASE; GENE;
D O I
10.3389/fgene.2023.1139994
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Despite the significant survival benefits of anti-PD-1/PD-L1 immunotherapy, non-small cell lung cancer (NSCLC) remains one of the most common tumors and major causes of cancer-related deaths worldwide. Thus, there is an urgent need to identify new therapeutic targets for this refractory disease.Methods: In this study, microarray datasets GSE27262, GSE75037, GSE102287, and GSE21933 were integrated by Venn diagram. We performed functional clustering and pathway enrichment analyses using R. Through the STRING database and Cytoscape, we conducted protein-protein interaction (PPI) network analysis and identified the key genes, which were verified by the GEPIA2 and UALCAN portal. Validation of actin-binding protein anillin (ANLN) was performed by quantitative real-time polymerase chain reaction and Western blotting. Additionally, Kaplan-Meier methods were used to compute the survival analyses.Results: In total, 126 differentially expressed genes were identified, which were enriched in mitotic nuclear division, mitotic cell cycle G2/M transition, vasculogenesis, spindle, and peroxisome proliferator-activated receptor signaling pathway. 12 central node genes were identified in the PPI network complex. The survival analysis revealed that high transcriptional levels were associated with inferior survival in NSCLC patients. The clinical implication of ANLN was further explored; its protein expression showed a gradually increasing trend from grade I to III.Conclusion: These Key genes may be involved in the carcinogenesis and progression of NSCLC, which may serve as useful targets for NSCLC diagnosis and treatment.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Novel Therapeutic Targets in Non-small Cell Lung Cancer
    Janku, Filip
    Garrido-Laguna, Ignacio
    Petruzelka, Lubos B.
    Stewart, David J.
    Kurzrock, Razelle
    JOURNAL OF THORACIC ONCOLOGY, 2011, 6 (09) : 1601 - 1612
  • [2] Novel therapeutic targets in non-small cell lung cancer
    Alamgeer, Muhammad
    Ganju, Vinod
    Watkins, D. Neil
    CURRENT OPINION IN PHARMACOLOGY, 2013, 13 (03) : 394 - 401
  • [3] Integrative Analysis for Identification of Therapeutic Targets and Prognostic Signatures in Non-Small Cell Lung Cancer
    Erkin, Ozgur Cem
    Comertpay, Betul
    Gov, Esra
    BIOINFORMATICS AND BIOLOGY INSIGHTS, 2022, 16
  • [4] Integrative Analysis for Identification of Therapeutic Targets and Prognostic Signatures in Non-Small Cell Lung Cancer
    Erkin, Ozgur Cem
    Comertpay, Betul
    Gov, Esra
    BIOINFORMATICS AND BIOLOGY INSIGHTS, 2022, 16
  • [5] Identification of New Therapeutic Targets in Non-Small Cell Lung Cancer
    O'Donnell, K. A.
    JOURNAL OF THORACIC ONCOLOGY, 2020, 15 (02) : S4 - S4
  • [6] Identification of Proteins Deregulated by Platinum-Based Chemotherapy as Novel Biomarkers and Therapeutic Targets in Non-Small Cell Lung Cancer
    Ryan, Sarah-Louise
    Dave, Keyur A.
    Beard, Sam
    Gyimesi, Martina
    McTaggart, Matthew
    Sahin, Katherine B.
    Molloy, Christopher
    Gandhi, Neha S.
    Boittier, Eric
    O'Leary, Connor G.
    Shah, Esha T.
    Bolderson, Emma
    Baird, Anne-Marie
    Richard, Derek J.
    O'Byrne, Kenneth J.
    Adams, Mark N.
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [7] Identification and validation of the methylation biomarkers of non-small cell lung cancer (NSCLC)
    Shicheng Guo
    Fengyang Yan
    Jibin Xu
    Yang Bao
    Ji Zhu
    Xiaotian Wang
    Junjie Wu
    Yi Li
    Weilin Pu
    Yan Liu
    Zhengwen Jiang
    Yanyun Ma
    Xiaofeng Chen
    Momiao Xiong
    Li Jin
    Jiucun Wang
    Clinical Epigenetics, 2015, 7
  • [8] Identification and validation of the methylation biomarkers of non-small cell lung cancer (NSCLC)
    Guo, Shicheng
    Yan, Fengyang
    Xu, Jibin
    Bao, Yang
    Zhu, Ji
    Wang, Xiaotian
    Wu, Junjie
    Li, Yi
    Pu, Weilin
    Liu, Yan
    Jiang, Zhengwen
    Ma, Yanyun
    Chen, Xiaofeng
    Xiong, Momiao
    Jin, Li
    Wang, Jiucun
    Clinical Epigenetics, 2015, 7 : 2 - 9
  • [9] miRNAs as Biomarkers and Therapeutic Targets in Non-Small Cell Lung Cancer: Current Perspectives
    Mateusz Florczuk
    Adam Szpechcinski
    Joanna Chorostowska-Wynimko
    Targeted Oncology, 2017, 12 : 179 - 200
  • [10] miRNAs as Biomarkers and Therapeutic Targets in Non-Small Cell Lung Cancer: Current Perspectives
    Florczuk, Mateusz
    Szpechcinski, Adam
    Chorostowska-Wynimko, Joanna
    TARGETED ONCOLOGY, 2017, 12 (02) : 179 - 200