The hydration shells of proteins mediate interactions, such as small molecule binding, that are vital to their biological function or in some cases their dysfunction. However, even when the structure of a protein is known, the properties of its hydration environment cannot be easily predicted due to the complex interplay between protein surface heterogeneity and the collective structure of water's hydrogen bonding network. This manuscript presents a theoretical study of the influence of surface charge heterogeneity on the polarization response of the liquid water interface. We focus our attention on classical point charge models of water, where the polarization response is limited to molecular reorientation. We introduce a new computational method for analyzing simulation data that is capable of quantifying water's collective polarization response and determining the effective surface charge distribution of hydrated surfaces over atomistic length scales. To illustrate the utility of this method, we present the results of molecular dynamics simulations of liquid water in contact with a heterogeneous model surface and the CheY protein.
机构:
Univ Calif Santa Barbara, Dept Phys, Santa Barbara, CA 93106 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Armstrong, Brandon D.
;
Choi, Jennifer
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Choi, Jennifer
;
Lopez, Carlos
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Chem & Biochem, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Jules Stein Eye Inst, Los Angeles, CA 90095 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Lopez, Carlos
;
Wesener, Darryl A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Wesener, Darryl A.
;
Hubbell, Wayne
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Chem & Biochem, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Jules Stein Eye Inst, Los Angeles, CA 90095 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Hubbell, Wayne
;
Cavagnero, Silvia
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Cavagnero, Silvia
;
Han, Songi
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem & Biochem, Madison, WI 53706 USA
Univ Wisconsin, Mat Res Lab, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Barnes, Ryan
;
Sun, Sheng
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Sun, Sheng
;
Fichou, Yann
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h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Fichou, Yann
;
Dahlquist, Frederick W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Dahlquist, Frederick W.
;
Heyden, Matthias
论文数: 0引用数: 0
h-index: 0
机构:
Max Planck Inst Kohlenforsch, D-45470 Mulheim, Germany
Arizona State Univ, Sch Mol Sci, Tempe, AZ 85281 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Heyden, Matthias
;
Han, Songi
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Univ Calif Santa Barbara, Dept Chem Engn, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
机构:
Univ Calif Santa Barbara, Dept Phys, Santa Barbara, CA 93106 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Armstrong, Brandon D.
;
Choi, Jennifer
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Choi, Jennifer
;
Lopez, Carlos
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Chem & Biochem, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Jules Stein Eye Inst, Los Angeles, CA 90095 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Lopez, Carlos
;
Wesener, Darryl A.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Wesener, Darryl A.
;
Hubbell, Wayne
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Los Angeles, Dept Chem & Biochem, Los Angeles, CA 90095 USA
Univ Calif Los Angeles, Jules Stein Eye Inst, Los Angeles, CA 90095 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Hubbell, Wayne
;
Cavagnero, Silvia
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
Cavagnero, Silvia
;
Han, Songi
论文数: 0引用数: 0
h-index: 0
机构:
Univ Wisconsin, Dept Chem & Biochem, Madison, WI 53706 USA
Univ Wisconsin, Mat Res Lab, Madison, WI 53706 USAUniv Wisconsin, Dept Chem, Madison, WI 53706 USA
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Barnes, Ryan
;
Sun, Sheng
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Sun, Sheng
;
Fichou, Yann
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Fichou, Yann
;
Dahlquist, Frederick W.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Dahlquist, Frederick W.
;
Heyden, Matthias
论文数: 0引用数: 0
h-index: 0
机构:
Max Planck Inst Kohlenforsch, D-45470 Mulheim, Germany
Arizona State Univ, Sch Mol Sci, Tempe, AZ 85281 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Heyden, Matthias
;
Han, Songi
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA
Univ Calif Santa Barbara, Dept Chem Engn, Santa Barbara, CA 93106 USAUniv Calif Santa Barbara, Dept Chem & Biochem, Santa Barbara, CA 93106 USA