Non-coding RNAs are correlated to TGF-β receptor type 2 in patients with colorectal cancer

被引:9
作者
Abkenar, Borhan Rahimi [1 ]
Mohammadi, Asghar [2 ]
Amoli, Hadi Ahmadi [3 ]
Soleimani, Ali Akbar [1 ]
Korani, Mohsen [4 ]
Mahmoodi, Hassan [1 ]
Najafi, Mohammad [1 ,5 ,6 ]
机构
[1] Iran Univ Med Sci, Biochem Dept, Tehran, Iran
[2] Zanjan Univ Med Sci, Shohada Hosp Tarom, Zanjan, Iran
[3] Univ Tehran Med Sci, Sina Hosp, Sina Trauma & Surg Res Ctr, Tehran, Iran
[4] Baqiyatallah Univ Med Sci, Fac Med, Dept Biochem, Tehran, Iran
[5] Iran Univ Med Sci, Microbial Biotechnol Res Ctr, Biochem Dept, Tehran, Iran
[6] Iran Univ Med Sci, Microbial Biotechnol Res Ctr, Biochem Dept, Shahid Hemmat Highway, Tehran 1449614535, Iran
关键词
CRC; lncRNA LAMTOR5-AS1; miR20a-5p; TGFBR2; MOLECULAR PATHOLOGICAL EPIDEMIOLOGY; EXPRESSION; CLASSIFICATION; INACTIVATION; METASTASIS; BIOMARKERS; MECHANISM; PROMOTES; LNCRNAS;
D O I
10.1002/jgm.3472
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
BackgroundMultiple molecular expression alterations, particularly in non-coding RNAs, play fundamental roles in the regulations of cellular processes and may relate to the occurrence and progression of colorectal cancer (CRC). In the present study, we investigated the associations between TGFBR2, miR20a-5p and long non-coding RNA (lncRNA) LAMTOR5-AS1 in CRC patients. MethodsColorectal cancer and adjacent normal tissue samples (n = 34) were prepared from CRC patients. The associations between TGFBR2, miR20a-5p and lncRNA LAMTOR5-AS1 were predicted using bioinformatics tools. The expression levels of TGFBR2, miR20a-5p and lncRNA LAMTOR5-AS1 were measured using a quantitative real-time polymerase chain reaction technique. The TGFBR2 protein values were measured by western blotting. The clinical importance of lncRNA LAMTOR5-AS1 was assessed using receiver operating characteristic curve. ResultsThe up-regulated levels of TGFBR2 (p = 0.02), TGFBR2 protein (p = 0.008) and lncRNA LAMTOR5-AS1 (p = 0.02) were significantly observed in CRC tissues compared to the adjacent normal tissues. The miR20a-5p expression level (p = 0.009) was downregulated in CRC tissues. In addition, the miR20a-5p expression level was inversely correlated to the TGFBR2 gene (r(2) = 0.88, p < 0.0001), protein (r(2) = 0.95, p < 0.0001) and lncRNA LAMTOR5-AS1 gene (r(2) = 0.93, p < 0.0001) expression levels. Based on the area under curve, the increase of lncRNA LAMTOR5-AS1 expression level with a sensitivity of 64.52% and specificity of 65.52% was considered in CRC patients. ConclusionsWe propose that miR20a-5p is inversely related to long non-coding RNA (lncRNA) LAMTOR5-AS, such that it may be involved in the regulation of TGFBR2 expression level in CRC patients.
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页数:8
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共 59 条
  • [1] Identification of miRNAs correlating with stage and progression of colorectal cancer
    Asadi, Milad
    Talesh, Shoan Taheri
    Gjerstorff, Morten Frier
    Shanehbandi, Dariush
    Baradaran, Behzad
    Hashemzadeh, Shahriar
    Zafari, Venus
    [J]. COLORECTAL CANCER, 2019, 8 (02)
  • [2] Identification by Real-time PCR of 13 mature microRNAs differentially expressed in colorectal cancer and non-tumoral tissues
    Bandres, E.
    Cubedo, E.
    Agirre, X.
    Malumbres, R.
    Zarate, R.
    Ramirez, N.
    Abajo, A.
    Navarro, A.
    Moreno, I.
    Monzo, M.
    Garcia-Foncillas, J.
    [J]. MOLECULAR CANCER, 2006, 5 (1)
  • [3] MiR-20a-5p functions as a potent tumor suppressor by targeting PPP6C in acute myeloid leukemia
    Bao, Fengchang
    Zhang, Lei
    Pei, Xiaohang
    Lian, Cheng
    Liu, Yanhui
    Tan, Hongna
    Lei, Pingchong
    [J]. PLOS ONE, 2021, 16 (09):
  • [4] 2-hydr_Ensemble: Lysine 2-hydroxyisobutyrylation identification with ensemble method
    Bao, Wenzheng
    Yang, Bin
    Chen, Baitong
    [J]. CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2021, 215
  • [5] Classification of Protein Structure Classes on Flexible Neutral Tree
    Bao, Wenzheng
    Wang, Dong
    Chen, Yuehui
    [J]. IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2017, 14 (05) : 1122 - 1133
  • [6] LncRNA UCA1, Upregulated in CRC Biopsies and Downregulated in Serum Exosomes, Controls mRNA Expression by RNA-RNA Interactions
    Barbagallo, Cristina
    Brex, Duilia
    Caponnetto, Angela
    Cimigliaro, Matilde
    Scalia, Marina
    Magnano, Antonio
    Caltabiano, Rosario
    Barbagallo, Davide
    Biondi, Antonio
    Cappellani, Alessandro
    Basile, Francesco
    Di Pietro, Cinzia
    Purrello, Michele
    Ragusa, Marco
    [J]. MOLECULAR THERAPY-NUCLEIC ACIDS, 2018, 12 : 229 - 241
  • [7] Long Noncoding RNA LAMTOR5-AS1 Interference Affects MicroRNA-506-3p/ E2F6-Mediated Behavior of Non-Small Cell Lung Cancer Cells
    Chen, Guojie
    Wang, Kai
    Li, Guoshu
    Wang, Leidong
    Xiao, Yangyang
    Chen, Bo
    [J]. ONCOLOGY RESEARCH, 2020, 28 (09) : 945 - 959
  • [8] LncRNAs act as prognostic and diagnostic biomarkers in renal cell carcinoma: a systematic review and meta-analysis
    Chen, Jianwen
    Chen, Yalei
    Gu, Liangyou
    Li, Xintao
    Gao, Yu
    Lyu, Xiangjun
    Chen, Luyao
    Luo, Guoxiong
    Wang, Lei
    Xie, Yongpeng
    Duan, Junyao
    Peng, Cheng
    Ma, Xin
    [J]. ONCOTARGET, 2016, 7 (45) : 74325 - 74336
  • [9] Potential impact and mechanism of Long Non-coding RNAs on cancer and associated T cells
    Chen, Wenxiu
    Liu, Shuna
    Wang, Fang
    [J]. JOURNAL OF CANCER, 2021, 12 (16): : 4873 - 4882
  • [10] Identification of dysregulated lncRNAs profiling and metastasis-associated lncRNAs in colorectal cancer by genome-wide analysis
    Chen, Yan
    Yu, Xiang
    Xu, Yongcan
    Shen, Hua
    [J]. CANCER MEDICINE, 2017, 6 (10): : 2321 - 2330