Expression signature and prognostic value of CREC gene family in human colorectal cancer

被引:3
|
作者
Ning, Junya [1 ]
Liu, Min [1 ]
Shen, Jing [1 ]
Wang, Deping [1 ]
Gao, Lijuan [1 ]
Li, Huiyu [2 ,3 ]
Cao, Jimin [1 ]
机构
[1] Shanxi Med Univ, Key Lab Cellular Physiol, Minist Educ, Taiyuan 030001, Peoples R China
[2] Shanxi Med Univ, Shanxi Bethune Hosp, Tongji Shanxi Hosp, Shanxi Acad Med Sci,Dept Gen Surg,Hosp 1, Taiyuan 030032, Peoples R China
[3] Huazhong Univ Sci & Technol, Tongji Hosp, Tongji Med Coll, Wuhan 430030, Peoples R China
基金
中国国家自然科学基金;
关键词
CREC family; Expression signature; Colorectal cancer; Prognosis; Bioinformatics; HEPATOCELLULAR-CARCINOMA; INTERACTION NETWORKS; PROMOTES; CALUMENIN; CELLS; IDENTIFICATION; PROLIFERATION; RECURRENCE; BIOMARKERS; PROTEINS;
D O I
10.1186/s12885-023-11303-5
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Colorectal cancer (CRC) is one of the malignant tumors with the highest morbidity and mortality and poor prognosis. The mammalian gene family of Cab45/reticulocalbin/ERC-45/calumenin (CREC) consists of RCN1, RCN2, RCN3, SDF4 and CALU. Although CREC family members have been associated with CRC, the expression pattern, prognostic value, and the role of CREC family in CRC remain unclear. In this study, the expression, survival and biological functions of CREC family in CRC were determined via bioinformatic datasets analysis and experimental verification on clinical CRC specimen. Bioinformatic analysis showed that the expression levels of most CREC family genes were higher in CRC tissues than in normal colorectal tissues. The qPCR and western blot results also revealed that the transcriptional and protein levels of CREC family were elevated in CRC tissues compared with adjacent tissues. Besides, CREC family was significantly correlated with advanced tumor stage and poor prognosis of CRC patients. The expression levels of CREC family had correlations with genomic mutation and methylation, and with the infiltration levels of CD4 + T cells, macrophages, neutrophils, and dendritic cells in the microenvironment of CRC. Functional networks enrichment analysis indicated that the genes of CREC family were essential factors for CRC metastasis. Collectively, these findings suggest that CREC family might be potential targets for the treatment of CRC and candidate prognostic markers for CRC patients.
引用
收藏
页数:17
相关论文
共 50 条
  • [41] Prognostic value of a hypoxia-related microRNA signature in patients with colorectal cancer
    Yang, Yongmei
    Qu, Ailin
    Wu, Qi
    Zhang, Xin
    Wang, Lili
    Li, Chen
    Dong, Zhaogang
    Du, Lutao
    Wang, Chuanxin
    AGING-US, 2020, 12 (01): : 35 - 52
  • [42] Prognostic value of a novel glycolysis-related gene expression signature for gastrointestinal cancer in the Asian population
    Rong Xia
    Hua Tang
    Jiemiao Shen
    Shuyu Xu
    Yinyin Liang
    Yuxin Zhang
    Xing Gong
    Yue Min
    Di Zhang
    Chenzhe Tao
    Shoulin Wang
    Yi Zhang
    Jinyou Yang
    Chao Wang
    Cancer Cell International, 21
  • [43] Identification of an age-related breast cancer gene expression signature with strong prognostic value.
    Ingebriktsen, Lise Martine
    Akslen, Lars Andreas
    Wik, Elisabeth
    CANCER RESEARCH, 2021, 81 (13)
  • [44] Prognostic value of a novel glycolysis-related gene expression signature for gastrointestinal cancer in the Asian population
    Xia, Rong
    Tang, Hua
    Shen, Jiemiao
    Xu, Shuyu
    Liang, Yinyin
    Zhang, Yuxin
    Gong, Xing
    Min, Yue
    Zhang, Di
    Tao, Chenzhe
    Wang, Shoulin
    Zhang, Yi
    Yang, Jinyou
    Wang, Chao
    CANCER CELL INTERNATIONAL, 2021, 21 (01)
  • [45] Investigating prognostic value of proinflammatory M1 gene expression in colorectal cancer patients
    Ahluwalia, Pankaj
    Bloomer, Chance
    Pundkar, Chetan
    Jones, Kimya
    Mondal, Ashis
    Gahlay, Gagandeep
    Kolhe, Ravindra
    CANCER RESEARCH, 2019, 79 (13)
  • [46] Bioinformatic analysis of the expression and prognostic value of chromobox family proteins in human breast cancer
    Xiaomin Li
    Junhe Gou
    Hongjiang Li
    Xiaoqin Yang
    Scientific Reports, 10
  • [47] Prognostic value and therapeutic implications of ZHX family member expression in human gastric cancer
    You, Yanjie
    Bai, Feihu
    Li, Haijun
    Ma, Yuhong
    Yao, Li
    Hu, Jinpeng
    Tian, Yonggang
    AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH, 2020, 12 (07): : 3376 - 3388
  • [48] Bioinformatic analysis of the expression and prognostic value of chromobox family proteins in human breast cancer
    Li, Xiaomin
    Gou, Junhe
    Li, Hongjiang
    Yang, Xiaoqin
    SCIENTIFIC REPORTS, 2020, 10 (01)
  • [49] The prognostic value of a cell cycle proliferation gene signature in bladder cancer
    Dancik, Garrett M.
    Theodorescu, Dan
    CANCER RESEARCH, 2012, 72
  • [50] Identification of a Prognostic Signature Associated With the Homeobox Gene Family for Bladder Cancer
    Dong, Bingqi
    Liang, Jiaming
    Li, Ding
    Song, Wenping
    Song, Jinbo
    Zhu, Mingkai
    Zhao, Shiming
    Ma, Yongkang
    Yang, Tiejun
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8