Expression signature and prognostic value of CREC gene family in human colorectal cancer

被引:3
|
作者
Ning, Junya [1 ]
Liu, Min [1 ]
Shen, Jing [1 ]
Wang, Deping [1 ]
Gao, Lijuan [1 ]
Li, Huiyu [2 ,3 ]
Cao, Jimin [1 ]
机构
[1] Shanxi Med Univ, Key Lab Cellular Physiol, Minist Educ, Taiyuan 030001, Peoples R China
[2] Shanxi Med Univ, Shanxi Bethune Hosp, Tongji Shanxi Hosp, Shanxi Acad Med Sci,Dept Gen Surg,Hosp 1, Taiyuan 030032, Peoples R China
[3] Huazhong Univ Sci & Technol, Tongji Hosp, Tongji Med Coll, Wuhan 430030, Peoples R China
基金
中国国家自然科学基金;
关键词
CREC family; Expression signature; Colorectal cancer; Prognosis; Bioinformatics; HEPATOCELLULAR-CARCINOMA; INTERACTION NETWORKS; PROMOTES; CALUMENIN; CELLS; IDENTIFICATION; PROLIFERATION; RECURRENCE; BIOMARKERS; PROTEINS;
D O I
10.1186/s12885-023-11303-5
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Colorectal cancer (CRC) is one of the malignant tumors with the highest morbidity and mortality and poor prognosis. The mammalian gene family of Cab45/reticulocalbin/ERC-45/calumenin (CREC) consists of RCN1, RCN2, RCN3, SDF4 and CALU. Although CREC family members have been associated with CRC, the expression pattern, prognostic value, and the role of CREC family in CRC remain unclear. In this study, the expression, survival and biological functions of CREC family in CRC were determined via bioinformatic datasets analysis and experimental verification on clinical CRC specimen. Bioinformatic analysis showed that the expression levels of most CREC family genes were higher in CRC tissues than in normal colorectal tissues. The qPCR and western blot results also revealed that the transcriptional and protein levels of CREC family were elevated in CRC tissues compared with adjacent tissues. Besides, CREC family was significantly correlated with advanced tumor stage and poor prognosis of CRC patients. The expression levels of CREC family had correlations with genomic mutation and methylation, and with the infiltration levels of CD4 + T cells, macrophages, neutrophils, and dendritic cells in the microenvironment of CRC. Functional networks enrichment analysis indicated that the genes of CREC family were essential factors for CRC metastasis. Collectively, these findings suggest that CREC family might be potential targets for the treatment of CRC and candidate prognostic markers for CRC patients.
引用
收藏
页数:17
相关论文
共 50 条
  • [21] Comprehensive analysis of expression and prognostic value of the claudin family in human breast cancer
    Yang, Guangda
    Jian, Liumeng
    Chen, Qianya
    AGING-US, 2021, 13 (06): : 8777 - 8796
  • [22] Development and validation of an immune-related gene pairs signature in colorectal cancer
    Wu, Jianping
    Zhao, Ying
    Zhang, Juanwen
    Wu, Qianxia
    Wangb, Weilin
    ONCOIMMUNOLOGY, 2019, 8 (07):
  • [23] Hypermethylation and prognostic implication of Syk gene in human colorectal cancer
    Yang, Zuli
    Huo, Lijun
    Chen, Hao
    Ni, Beibei
    Xiang, Jun
    Kang, Liang
    Wang, Lei
    Peng, Junsheng
    Yuan, Yunfei
    Wang, Jianping
    MEDICAL ONCOLOGY, 2013, 30 (02)
  • [24] Periostin Expression and Its Prognostic Value for Colorectal Cancer
    Li, Zewu
    Zhang, Xin
    Yang, Yongmei
    Yang, Sanhui
    Dong, Zhaogang
    Du, Lutao
    Wang, Lili
    Wang, Chuanxin
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2015, 16 (06) : 12108 - 12118
  • [25] Prognostic value of small mother against decapentaplegic expression in human gastric cancer
    Zhang, He-Wei
    Guo, Ying
    Sun, Lin-xiao
    Ni, Fu-biao
    Xu, Ke
    BIOENGINEERED, 2021, 12 (01) : 2534 - 2549
  • [26] Identification of a Six-Gene SLC Family Signature With Prognostic Value in Patients With Lung Adenocarcinoma
    Zhu, Jing
    Mou, Yong
    Ye, Shenglan
    Hu, Hongling
    Wang, Rujuan
    Yang, Qing
    Hu, Yi
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2021, 9
  • [27] A pyroptosis-related signature in colorectal cancer: exploring its prognostic value and immunological characteristics
    Jiang, Peicheng
    Fan, Jin
    Huang, Shenglin
    Liu, Luying
    Bai, Minghua
    Sun, Quanquan
    Shen, Jinwen
    Zhang, Na
    Liu, Dong
    Zhou, Ning
    Feng, Yanru
    Jiang, Jin
    Zhu, Ji
    PEERJ, 2023, 11
  • [28] The clinical relevance of gene expression based prognostic signatures in colorectal cancer
    Ahluwalia, Pankaj
    Kolhe, Ravindra
    Gahlay, Gagandeep K.
    BIOCHIMICA ET BIOPHYSICA ACTA-REVIEWS ON CANCER, 2021, 1875 (02):
  • [29] Prognostic gene expression signature for high-grade serous ovarian cancer
    Millstein, J.
    Budden, T.
    Goode, E. L.
    Anglesio, M. S.
    Talhouk, A.
    Intermaggio, M. P.
    Leong, H. S.
    Chen, S.
    Elatre, W.
    Gilks, B.
    Nazeran, T.
    Volchek, M.
    Bentley, R. C.
    Wang, C.
    Chiu, D. S.
    Kommoss, S.
    Leung, S. C. Y.
    Senz, J.
    Lum, A.
    Chow, V
    Sudderuddin, H.
    Mackenzie, R.
    George, J.
    Fereday, S.
    Hendley, J.
    Traficante, N.
    Steed, H.
    Koziak, J. M.
    Kobel, M.
    McNeish, I. A.
    Goranova, T.
    Ennis, D.
    Macintyre, G.
    De Silva, D. Silva
    Ramon y Cajal, T.
    Garcia-Donas, J.
    Hernando Polo, S.
    Rodriguez, G. C.
    Cushing-Haugen, K. L.
    Harris, H. R.
    Greene, C. S.
    Zelaya, R. A.
    Behrens, S.
    Fortner, R. T.
    Sinn, P.
    Herpel, E.
    Lester, J.
    Lubinski, J.
    Oszurek, O.
    Toloczko, A.
    ANNALS OF ONCOLOGY, 2020, 31 (09) : 1240 - 1250
  • [30] A novel 4-gene prognostic signature for hypermutated colorectal cancer
    Ge, Weiting
    Cai, Wen
    Bai, Rui
    Hu, Wangxiong
    Wu, Dehao
    Zheng, Shu
    Hu, Hanguang
    CANCER MANAGEMENT AND RESEARCH, 2019, 11 : 1985 - 1996