The panzootic potential of SARS-CoV-2

被引:3
作者
Mabry, Makenzie E. [1 ]
Fanelli, Angela [2 ]
Mavian, Carla [3 ,4 ]
Lorusso, Alessio [5 ]
Manes, Costanza [6 ,7 ]
Soltis, Pamela S. [1 ]
Capua, Ilaria [7 ,8 ]
机构
[1] Univ Florida, Florida Museum Nat Hist, Gainesville, FL 32611 USA
[2] Univ Bari, Dept Vet Med, Valenzano, Bari, Italy
[3] Univ Florida, Emerging Pathogens Inst, Gainesville, FL USA
[4] Univ Florida, Dept Pathol, Gainesville, FL USA
[5] Ist Zooprofilatt Sperimentale Abruzzo & Molise G C, Teramo, Italy
[6] Univ Florida, Dept Wildlife Ecol & Conservat, Gainesville, FL USA
[7] Univ Florida, One Hlth Ctr Excellence, Gainesville, FL USA
[8] Johns Hopkins Univ, Sch Adv Int Studies, Bologna, Italy
基金
美国国家科学基金会;
关键词
SARS-CoV-2; evolution; mammals; panzootic; mutations; DELTA VARIANT; INFECTION; CORONAVIRUS; SUSCEPTIBILITY; ACE2; TRANSMISSION; MACAQUES; COVID-19; HAMSTERS; RECEPTOR;
D O I
10.1093/biosci/biad102
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Each year, SARS-CoV-2 is infecting an increasingly unprecedented number of species. In the present article, we combine mammalian phylogeny with the genetic characteristics of isolates found in mammals to elaborate on the host-range potential of SARS-CoV-2. Infections in nonhuman mammals mirror those of contemporary viral strains circulating in humans, although, in certain species, extensive viral circulation has led to unique genetic signatures. As in other recent studies, we found that the conservation of the ACE2 receptor cannot be considered the sole major determinant of susceptibility. However, we are able to identify major clades and families as candidates for increased surveillance. On the basis of our findings, we argue that the use of the term panzootic could be a more appropriate term than pandemic to describe the ongoing scenario. This term better captures the magnitude of the SARS-CoV-2 host range and would hopefully inspire inclusive policy actions, including systematic screenings, that could better support the management of this worldwide event.
引用
收藏
页码:814 / 829
页数:16
相关论文
共 175 条
[1]   Pandemic or Panzootic - A Reflection on Terminology for SARS-CoV-2 Infection [J].
Agnelli, Sara ;
Capua, Ilaria .
EMERGING INFECTIOUS DISEASES, 2022, 28 (12) :2552-2555
[2]   Epidemiological and genomic findings of the first documented Italian outbreak of SARS-CoV-2 Alpha variant of concern [J].
Amato, Laura ;
Candeloro, Luca ;
Di Girolamo, Arturo ;
Savini, Lara ;
Puglia, Ilaria ;
Marcacci, Maurilia ;
Caporale, Marialuigia ;
Mangone, Iolanda ;
Camm, Cesare ;
Conte, Annamaria ;
Torzi, Giuseppe ;
Mancinelli, Adamo ;
Di Giallonardo, Francesca ;
Lorusso, Alessio ;
Migliorati, Giacomo ;
Schael, Thomas ;
Alterio, Nicola ;
Calistri, Paolo .
EPIDEMICS, 2022, 39
[3]  
[Anonymous], 2021, BBC News
[4]   SARS-CoV-2, a Threat to Marine Mammals? A Study from Italian Seawaters [J].
Audino, Tania ;
Grattarola, Carla ;
Centelleghe, Cinzia ;
Peletto, Simone ;
Giorda, Federica ;
Florio, Caterina Lucia ;
Caramelli, Maria ;
Bozzetta, Elena ;
Mazzariol, Sandro ;
Di Guardo, Giovanni ;
Lauriano, Giancarlo ;
Casalone, Cristina .
ANIMALS, 2021, 11 (06)
[5]   Susceptibility and Attenuated Transmissibility of SARS-CoV-2 in Domestic Cats [J].
Bao, Linlin ;
Song, Zhiqi ;
Xue, Jing ;
Gao, Hong ;
Liu, Jiangning ;
Wang, Jie ;
Guo, Qian ;
Zhao, Binbin ;
Qu, Yajin ;
Qi, Feifei ;
Gong, Shuran ;
Liu, Mingya ;
Lv, Qi ;
Li, Dan ;
Han, Yunlin ;
Zhao, Wenjie ;
Deng, Shoulong ;
Liu, Yunpeng ;
Xiang, Zhiguang ;
Yang, Bochao ;
Deng, Wei ;
Yu, Haisheng ;
Cong, Zhe ;
Wei, Qiang ;
Xu, Jianguo ;
Gao, George F. ;
Qin, Chuan .
JOURNAL OF INFECTIOUS DISEASES, 2021, 223 (08) :1313-1321
[6]  
Barrs VR, 2020, EMERG INFECT DIS, V26, P3071, DOI [10.3201/eid2612.202786, 10.3201/eid2612.202786.]
[7]   The SARS-CoV-2 Y453F mink variant displays a pronounced increase in ACE-2 affinity but does not challenge antibody neutralization [J].
Bayarri-Olmos, Rafael ;
Rosbjerg, Anne ;
Johnsen, Laust Bruun ;
Helgstrand, Charlotte ;
Bak-Thomsen, Theresa ;
Garred, Peter ;
Skjoedt, Mikkel-Ole .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2021, 296
[8]   Optimising predictive models to prioritise viral discovery in zoonotic reservoirs [J].
Becker, Daniel J. ;
Albery, Gregory F. ;
Sjodin, Anna R. ;
Poisot, Timothee ;
Bergner, Laura M. ;
Chen, Binqi ;
Cohen, Lily E. ;
Dallas, Tad A. ;
Eskew, Evan A. ;
Fagre, Anna C. ;
Farrell, Maxwell J. ;
Guth, Sarah ;
Han, Barbara A. ;
Simmons, Nancy B. ;
Stock, Michiel ;
Teeling, Emma C. ;
Carlson, Colin J. .
LANCET MICROBE, 2022, 3 (08) :E625-E637
[9]   The evolution of genome compression and genomic novelty in RNA viruses [J].
Belshaw, Robert ;
Pybus, Oliver G. ;
Rambaut, Andrew .
GENOME RESEARCH, 2007, 17 (10) :1496-1504
[10]   SARS-CoV-2 infection of Chinese hamsters (Cricetulus griseus) reproduces COVID-19 pneumonia in a well-established small animal model [J].
Bertzbach, Luca D. ;
Vladimirova, Daria ;
Dietert, Kristina ;
Abdelgawad, Azza ;
Gruber, Achim D. ;
Osterrieder, Nikolaus ;
Trimpert, Jakob .
TRANSBOUNDARY AND EMERGING DISEASES, 2021, 68 (03) :1075-1079