Predicting future falls in older people using natural language processing of general practitioners' clinical notes

被引:7
|
作者
Dormosh, Noman [1 ,2 ]
Schut, Martijn C. [1 ,3 ,4 ]
Heymans, Martijn W. [5 ,6 ]
Maarsingh, Otto [7 ,8 ]
Bouman, Jonathan [9 ]
van der Velde, Nathalie [10 ,11 ]
Abu-Hanna, Ameen [1 ,2 ]
机构
[1] Univ Amsterdam, Amsterdam UMC, Dept Med Informat, Amsterdam, Netherlands
[2] Amsterdam Publ Hlth, Aging & Later Life & Methodol Amsterdam, Amsterdam, Netherlands
[3] Vrije Univ Amsterdam, Amsterdam UMC, Dept Clin Chem, Amsterdam, Netherlands
[4] Amsterdam Publ Hlth, Methodol & Qual Care, Amsterdam, Netherlands
[5] Vrije Univ Amsterdam, Amsterdam UMC, Dept Epidemiol & Data Sci, Amsterdam, Netherlands
[6] Amsterdam Publ Hlth, Methodol & Personalized Med, Amsterdam, Netherlands
[7] Vrije Univ Amsterdam, Amsterdam UMC, Dept Gen practice, Amsterdam, Netherlands
[8] Amsterdam Publ Hlth, Aging & Later Life & Mental Hlth, Amsterdam, Netherlands
[9] Univ Amsterdam, Amsterdam UMC, Dept Gen Practice, Amsterdam, Netherlands
[10] Univ Amsterdam, Amsterdam UMC, Dept Internal Med, Sect Geriatr Med, Amsterdam, Netherlands
[11] Amsterdam Publ Hlth, Aging & Later Life, Amsterdam, Netherlands
关键词
accidental falls; fall prediction; natural language processing; electronic health records; free text; topic modelling; older people; RISK-FACTORS; ADULTS; CARE; CONSEQUENCES; INFORMATION; CHALLENGES; INJURIES; MODELS;
D O I
10.1093/ageing/afad046
中图分类号
R592 [老年病学]; C [社会科学总论];
学科分类号
03 ; 0303 ; 100203 ;
摘要
Background Falls in older people are common and morbid. Prediction models can help identifying individuals at higher fall risk. Electronic health records (EHR) offer an opportunity to develop automated prediction tools that may help to identify fall-prone individuals and lower clinical workload. However, existing models primarily utilise structured EHR data and neglect information in unstructured data. Using machine learning and natural language processing (NLP), we aimed to examine the predictive performance provided by unstructured clinical notes, and their incremental performance over structured data to predict falls. Methods We used primary care EHR data of people aged 65 or over. We developed three logistic regression models using the least absolute shrinkage and selection operator: one using structured clinical variables (Baseline), one with topics extracted from unstructured clinical notes (Topic-based) and one by adding clinical variables to the extracted topics (Combi). Model performance was assessed in terms of discrimination using the area under the receiver operating characteristic curve (AUC), and calibration by calibration plots. We used 10-fold cross-validation to validate the approach. Results Data of 35,357 individuals were analysed, of which 4,734 experienced falls. Our NLP topic modelling technique discovered 151 topics from the unstructured clinical notes. AUCs and 95% confidence intervals of the Baseline, Topic-based and Combi models were 0.709 (0.700-0.719), 0.685 (0.676-0.694) and 0.718 (0.708-0.727), respectively. All the models showed good calibration. Conclusions Unstructured clinical notes are an additional viable data source to develop and improve prediction models for falls compared to traditional prediction models, but the clinical relevance remains limited.
引用
收藏
页数:11
相关论文
共 50 条
  • [21] A Natural Language Processing Model to Identify Confidential Content in Adolescent Clinical Notes
    Rabbani, Naveed
    Bedgood, Michael
    Brown, Conner
    Steinberg, Ethan
    Goldstein, Rachel L. L.
    Carlson, Jennifer L. L.
    Pageler, Natalie
    Morse, Keith E. E.
    APPLIED CLINICAL INFORMATICS, 2023, 14 (03): : 400 - 407
  • [22] Predicting Inpatient Falls Using Natural Language Processing of Nursing Records Obtained From Japanese Electronic Medical Records: Case-Control Study
    Nakatani, Hayao
    Nakao, Masatoshi
    Uchiyama, Hidefumi
    Toyoshiba, Hiroyoshi
    Ochiai, Chikayuki
    JMIR MEDICAL INFORMATICS, 2020, 8 (04)
  • [23] A Natural Language Processing Approach to Automated Highlighting of New Information in Clinical Notes
    Su, Yu-Hsiang
    Chao, Ching-Ping
    Hung, Ling-Chien
    Sung, Sheng-Feng
    Lee, Pei-Ju
    APPLIED SCIENCES-BASEL, 2020, 10 (08):
  • [24] Natural language processing for clinical notes in dentistry: A systematic review
    Pethani, Farhana
    Dunn, Adam G.
    JOURNAL OF BIOMEDICAL INFORMATICS, 2023, 138
  • [25] Natural language processing of German clinical colorectal cancer notes for guideline-based treatment evaluation
    Becker, Matthias
    Kasper, Stefan
    Boeckmann, Britta
    Joeckel, Karl-Heinz
    Virchow, Isabel
    INTERNATIONAL JOURNAL OF MEDICAL INFORMATICS, 2019, 127 : 141 - 146
  • [26] Development and validation of a pragmatic natural language processing approach to identifying falls in older adults in the emergency department
    Patterson, Brian W.
    Jacobsohn, Gwen C.
    Shah, Manish N.
    Song, Yiqiang
    Maru, Apoorva
    Venkatesh, Arjun K.
    Zhong, Monica
    Taylor, Katherine
    Hamedani, Azita G.
    Mendonca, Eneida A.
    BMC MEDICAL INFORMATICS AND DECISION MAKING, 2019, 19 (1)
  • [27] Extraction of sleep information from clinical notes of Alzheimer's disease patients using natural language processing
    Sivarajkumar, Sonish
    Tam, Thomas Yu Chow
    Mohammad, Haneef Ahamed
    Viggiano, Samuel
    Oniani, David
    Visweswaran, Shyam
    Wang, Yanshan
    JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION, 2024, 31 (10) : 2217 - 2227
  • [28] Predicting stock market using natural language processing
    Puh, Karlo
    Babac, Marina Bagic
    AMERICAN JOURNAL OF BUSINESS, 2023, 38 (02) : 41 - 61
  • [29] Using Natural Language Processing to Understand People and Culture
    Berger, Jonah
    Packard, Grant
    AMERICAN PSYCHOLOGIST, 2022, 77 (04) : 525 - 537
  • [30] Using clinical Natural Language Processing for health outcomes research: Overview and actionable suggestions for future advances
    Velupillai, Sumithra
    Suominen, Hanna
    Liakata, Maria
    Roberts, Angus
    Shah, Anoop D.
    Morley, Katherine
    Osborn, David
    Hayes, Joseph
    Stewart, Robert
    Downs, Johnny
    Chapman, Wendy
    Dutta, Rina
    JOURNAL OF BIOMEDICAL INFORMATICS, 2018, 88 : 11 - 19