A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants

被引:1
|
作者
Zou, Baiming [1 ,2 ]
Mi, Xinlei [3 ]
Stone, Elizabeth [2 ]
Zou, Fei [1 ,4 ]
机构
[1] Univ N Carolina, Dept Biostat, Chapel Hill, NC 27599 USA
[2] Univ N Carolina, Sch Nursing, Chapel Hill, NC 27599 USA
[3] Northwestern Univ, Dept Prevent Med Biostat Quantitat Data Sci Core Q, Chicago, IL 60611 USA
[4] Univ N Carolina, Dept Genet, Chapel Hill, NC 27599 USA
基金
美国国家卫生研究院;
关键词
Deep neural network; Diagnosis test; Feature importance; Head trauma; Testable machine learning; Permutation; PEDIATRIC HEAD-INJURIES; CHILDREN; PREDICTION; REGRESSION;
D O I
10.1186/s12911-023-02155-x
中图分类号
R-058 [];
学科分类号
摘要
Objective We aimed to develop a robust framework to model the complex association between clinical features and traumatic brain injury (TBI) risk in children under age two, and identify significant features to derive clinical decision rules for triage decisions.Methods In this retrospective study, four frequently used machine learning models, i.e., support vector machine (SVM), random forest (RF), deep neural network (DNN), and XGBoost (XGB), were compared to identify significant clinical features from 24 input features associated with the TBI risk in children under age two under the permutation feature importance test (PermFIT) framework by using the publicly available data set from the Pediatric Emergency Care Applied Research Network (PECARN) study. The prediction accuracy was determined by comparing the predicted TBI status with the computed tomography (CT) scan results since CT scan is the gold standard for diagnosing TBI.Results At a significance level ofp = 0.05 , DNN, RF, XGB, and SVM identified 9, 1, 2, and 4 significant features, respectively. In a comparison of accuracy (Accuracy), the area under the curve (AUC), and the precision-recall area under the curve (PR-AUC), the permutation feature importance test for DNN model was the most powerful framework for identifying significant features and outperformed other methods, i.e., RF, XGB, and SVM, with Accuracy, AUC, and PR-AUC as 0.915, 0.794, and 0.974, respectively.Conclusion These results indicate that the PermFIT-DNN framework robustly identifies significant clinical features associated with TBI status and improves prediction performance. The findings could be used to inform the development of clinical decision tools designed to inform triage decisions.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] A deep neural network framework to derive interpretable decision rules for accurate traumatic brain injury identification of infants
    Baiming Zou
    Xinlei Mi
    Elizabeth Stone
    Fei Zou
    BMC Medical Informatics and Decision Making, 23
  • [2] An interpretable neural network for outcome prediction in traumatic brain injury
    Minoccheri, Cristian
    Williamson, Craig A.
    Hemmila, Mark
    Ward, Kevin
    Stein, Erica B.
    Gryak, Jonathan
    Najarian, Kayvan
    BMC MEDICAL INFORMATICS AND DECISION MAKING, 2022, 22 (01)
  • [3] An interpretable neural network for outcome prediction in traumatic brain injury
    Cristian Minoccheri
    Craig A. Williamson
    Mark Hemmila
    Kevin Ward
    Erica B. Stein
    Jonathan Gryak
    Kayvan Najarian
    BMC Medical Informatics and Decision Making, 22
  • [4] Piecewise integrable neural network: An interpretable chaos identification framework
    Novelli, Nico
    Belardinelli, Pierpaolo
    Lenci, Stefano
    CHAOS, 2023, 33 (02)
  • [5] Brain age prediction using interpretable multi-feature-based convolutional neural network in mild traumatic brain injury
    Zhang, Xiang
    Pan, Yizhen
    Wu, Tingting
    Zhao, Wenpu
    Zhang, Haonan
    Ding, Jierui
    Ji, Qiuyu
    Jia, Xiaoyan
    Li, Xuan
    Lee, Zhiqi
    Zhang, Jie
    Bai, Lijun
    NEUROIMAGE, 2024, 297
  • [6] Use of Traumatic Brain Injury Prediction Rules With Clinical Decision Support\
    Dayan, Peter S.
    Ballard, Dustin W.
    Tham, Eric
    Hoffman, Jeff M.
    Swietlik, Marguerite
    Deakyne, Sara J.
    Alessandrini, Evaline A.
    Tzimenatos, Leah
    Bajaj, Lalit
    Vinson, David R.
    Mark, Dustin G.
    Offerman, Steve R.
    Chettipally, Uli K.
    Paterno, Marilyn D.
    Schaeffer, Molly H.
    Wang, Jun
    Casper, T. Charles
    Goldberg, Howard S.
    Grundmeier, Robert W.
    Kuppermann, Nathan
    PEDIATRICS, 2017, 139 (04)
  • [7] A DEEP LEARNING FRAMEWORK FOR BRAIN EXTRACTION IN HUMANS AND ANIMALS WITH TRAUMATIC BRAIN INJURY
    Roy, Snehashis
    Knutsen, Andrew
    Korotcov, Alexandru
    Bosomtwi, Asamoah
    Dardzinski, Bernard
    Butman, John A.
    Pham, Dzung L.
    2018 IEEE 15TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING (ISBI 2018), 2018, : 687 - 691
  • [8] Using an artificial neural network to predict traumatic brain injury
    Hale, Andrew T.
    Stonko, David P.
    Lim, Jaims
    Guillamondegui, Oscar D.
    Shannon, Chevis N.
    Patel, Mayur B.
    JOURNAL OF NEUROSURGERY-PEDIATRICS, 2019, 23 (02) : 219 - 226
  • [9] Interpretable 3D Multi-modal Residual Convolutional Neural Network for Mild Traumatic Brain Injury Diagnosis
    Ellethy, Hanem
    Vegh, Viktor
    Chandra, Shekhar S.
    ADVANCES IN ARTIFICIAL INTELLIGENCE, AI 2023, PT I, 2024, 14471 : 483 - 494
  • [10] NetBCE: An Interpretable Deep Neural Network for Accurate Prediction of Linear B-cell Epitopes
    Haodong Xu
    Zhongming Zhao
    Genomics,Proteomics & Bioinformatics, 2022, (05) : 1002 - 1012