Comprehensive analysis the prognostic and immune characteristics of mitochondrial transport-related gene SFXN1 in lung adenocarcinoma

被引:4
作者
Liu, Wenting [1 ]
Du, Qingwu [1 ]
Mei, Ting [1 ]
Wang, Jingya [1 ]
Huang, Dingzhi [1 ]
Qin, Tingting [1 ]
机构
[1] Tianjin Med Univ Canc Inst & Hosp, Tianjin Key Lab Canc Prevent & Therapy Tianjin, Tianjins Clin Res Ctr Canc, Dept Thorac Oncol,Natl Clin Res Ctr Canc, Tianjin, Peoples R China
基金
中国国家自然科学基金;
关键词
SFXN1; Lung adenocarcinoma; Biomarker; Prognosis; Tumor immune microenvironment; TRANSMEMBRANE PROTEIN; CANCER; METABOLISM; EXPRESSION;
D O I
10.1186/s12885-023-11646-z
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
BackgroundMitochondria, which serve as the fundamental organelle for cellular energy and metabolism, are closely linked to the growth and survival of cancer cells. This study aims to identify and assess Sideroflexin1 (SFXN1), an unprecedented mitochondrial gene, as a potential prognostic biomarker for lung adenocarcinoma (LUAD).MethodsThe mRNA and protein levels of SFXN1 were investigated based on the Cancer Genome Atlas (TCGA) LUAD dataset, and then validated by real-time quantitative PCR, Western Blotting and immunohistochemistry from our clinical samples. The clinical correlation and prognostic value were evaluated by the TCGA cohort and verified via our clinical dataset (n = 90). The somatic mutation, drug sensitivity data, immune cell infiltration and single-cell RNA sequencing data of SFXN1 were analyzed through public databases.ResultsSFXN1 was markedly upregulated at both mRNA and protein levels in LUAD, and high expression of SFXN1 were correlated with larger tumor size, positive lymph node metastasis, and advanced clinical stage. Furthermore, SFXN1 upregulation was significantly associated with poor clinical prognosis. SFXN1 co-expressed genes were also analyzed, which were mainly involved in the cell cycle, central carbon metabolism, DNA repair, and the HIF-1 alpha signaling pathway. Additionally, SFXN1 expression correlated with the expression of multiple immunomodulators, which act to regulate the tumor immune microenvironment. Results also demonstrated an association between SFXN1 expression and increased immune cell infiltration, such as activated CD8 + T cells, natural killer cells (NKs), activated dendritic cells (DCs), and macrophages. LUAD patients with high SFXN1 expression exhibited heightened sensitivity to multiple chemotherapies and targeted drugs and predicted a poor response to immunotherapy. SFXN1 represented an independent prognostic marker for LUAD patients with an improved prognostic value for overall survival when combined with clinical stage information.ConclusionsSFXN1 is frequently upregulated in LUAD and has a significant impact on the tumor immune environment. Our study uncovers the potential of SFXN1 as a prognostic biomarker and as a novel target for intervention in LUAD.
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页数:20
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