Integrated microscale immiscible phase extraction and isothermal amplification for colorimetric detection of Neisseria gonorrhoeae

被引:3
作者
Rodriguez-Mateos, Pablo [1 ]
Ngamsom, Bongkot [2 ]
Ameyo, Daglus [3 ]
Wakaba, Patrick [3 ]
Shiluli, Clement [3 ]
Iles, Alexander [1 ]
Gitaka, Jesse [3 ]
Pamme, Nicole [1 ,4 ]
机构
[1] Stockholm Univ, Dept Mat & Environm Chem, Stockholm, Sweden
[2] Univ Hull, Ctr Biomed, Hull York Med Sch, Kingston Upon Hull, England
[3] Mt Kenya Univ, Directorate Res & Innovat, Thika, Kenya
[4] Univ Hull, Sch Nat Sci, Kingston Upon Hull, England
关键词
Immiscible filtration; DNA extraction; Magnetic particle; NAAT; LAMP; Neisseria gonorrhoeae; CHLAMYDIA-TRACHOMATIS; PURIFICATION; PERFORMANCE; IFAST; ASSAY; CT/NG;
D O I
10.1007/s00216-023-04734-3
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Gonorrhea is the second most common sexually transmitted infection (STI) with around 87 million cases worldwide estimated in 2016 by the World Health Organization. With over half of the cases being asymptomatic, potential life-threatening complications and increasing numbers of drug-resistant strains, routine monitoring of prevalence and incidence of infections are key preventive measures. Whilst gold standard qPCR tests have excellent accuracy, they are neither affordable nor accessible in low-resource settings. In this study, we developed a lab-on-a-chip platform based on microscale immiscible filtration to extract, concentrate and purify Neisseria gonorrhoeae DNA with an integrated detection assay based on colorimetric isothermal amplification. The platform was capable of detecting as low as 500 copies/mL from spiked synthetic urine and showed no cross-reactivity when challenged with DNAs from other common STIs. The credit card-size device allows DNA extraction and purification without power or centrifuges, and the detection reaction only needs a low-tech block heater, providing a straightforward and visual positive/negative result within 1 h. These advantages offer great potential for accurate, affordable and accessible monitoring of gonorrhea infection in resource-poor settings.
引用
收藏
页码:5129 / 5137
页数:9
相关论文
共 42 条
  • [1] Streamlining Immunoassays with Immiscible Filtrations Assisted by Surface Tension
    Berry, Scott M.
    Maccoux, Lindsey J.
    Beebe, David J.
    [J]. ANALYTICAL CHEMISTRY, 2012, 84 (13) : 5518 - 5523
  • [2] One-step purification of nucleic acid for gene expression analysis via Immiscible Filtration Assisted by Surface Tension (IFAST)
    Berry, Scott M.
    Alarid, Elaine T.
    Beebe, David J.
    [J]. LAB ON A CHIP, 2011, 11 (10) : 1747 - 1753
  • [3] Centers for Disease Control and Prevention, 2019, ANTIBIOTIC RESISTANC
  • [4] Centers for Disease Control and Prevention, 2021, SEXUALLY TRANSMITTED
  • [5] Visual and Rapid Diagnosis of Neisseria gonorrhoeae Using Loop-Mediated Isothermal Amplification Combined With a Polymer Nanoparticle-Based Biosensor in Clinical Application
    Chen, Xu
    Zhou, Qingxue
    Wu, Xueli
    Wang, Shuoshi
    Liu, Rui
    Dong, Shilei
    Yuan, Wei
    [J]. FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
  • [6] Clarkson MR, 2011, POCKET COMPANION BRE, P27
  • [7] Multiplex Strand Invasion Based Amplification (mSIBA) assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae
    Eboigbodin, Kevin E.
    Hoser, Mark J.
    [J]. SCIENTIFIC REPORTS, 2016, 6
  • [8] Loop-Mediated Isothermal Amplification Test for Detection of Neisseria gonorrhoeae in Urine Samples and Tolerance of the Assay to the Presence of Urea
    Edwards, Thomas
    Burke, Patricia A.
    Smalley, Helen B.
    Gillies, Liz
    Hobbs, Glyn
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2014, 52 (06) : 2163 - 2165
  • [9] Enhanced immunoprecipitation techniques for the identification of RNA-binding protein partners: IGF2BP1 interactions in mammary epithelial cells
    Fakhraldeen, Saja A.
    Berry, Scott M.
    Beebe, David J.
    Roopra, Avtar
    Bisbach, Celia M.
    Spiegelman, Vladimir S.
    Niemi, Natalie M.
    Alexander, Caroline M.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2022, 298 (03)
  • [10] Performance of the Abbott RealTime CT/NG for Detection of Chlamydia trachomatis and Neisseria gonorrhoeae
    Gaydos, C. A.
    Cartwright, C. P.
    Colaninno, P.
    Welsch, J.
    Holden, J.
    Ho, S. Y.
    Webb, E. M.
    Anderson, C.
    Bertuzis, R.
    Zhang, L.
    Miller, T.
    Leckie, G.
    Abravaya, K.
    Robinson, J.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (09) : 3236 - 3243