Cross-species transcriptomic atlas of dorsal root ganglia reveals species-specific programs for sensory function

被引:103
作者
Jung, Min [1 ]
Dourado, Michelle [2 ]
Maksymetz, James [2 ]
Jacobson, Amanda [3 ]
Laufer, Benjamin I. [1 ]
Baca, Miriam [4 ]
Foreman, Oded [4 ]
Hackos, David H. [2 ]
Riol-Blanco, Lorena [3 ]
Kaminker, Joshua S. [1 ]
机构
[1] Genentech Inc, Dept OMNI Bioinformat, San Francisco, CA 94080 USA
[2] Genentech Inc, Dept Neurosci, San Francisco, CA 94080 USA
[3] Genentech Inc, Dept Immunol Discovery, San Francisco, CA 94080 USA
[4] Genentech Inc, Dept Pathol, San Francisco, CA USA
关键词
SODIUM-CHANNELS; NEURONS; PAIN; CELL;
D O I
10.1038/s41467-023-36014-0
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Sensory neurons are critical for maintaining tissue homeostasis. Here, the authors generated a single-nuclei cross-species atlas of the dorsal root ganglia, revealing conserved programs for sensory function that could inform therapeutic hypotheses. Sensory neurons of the dorsal root ganglion (DRG) are critical for maintaining tissue homeostasis by sensing and initiating responses to stimuli. While most preclinical studies of DRGs are conducted in rodents, much less is known about the mechanisms of sensory perception in primates. We generated a transcriptome atlas of mouse, guinea pig, cynomolgus monkey, and human DRGs by implementing a common laboratory workflow and multiple data-integration approaches to generate high-resolution cross-species mappings of sensory neuron subtypes. Using our atlas, we identified conserved core modules highlighting subtype-specific biological processes related to inflammatory response. We also identified divergent expression of key genes involved in DRG function, suggesting species-specific adaptations specifically in nociceptors that likely point to divergent function of nociceptors. Among these, we validated that TAFA4, a member of the druggable genome, was expressed in distinct populations of DRG neurons across species, highlighting species-specific programs that are critical for therapeutic development.
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页数:15
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