Experimental Spectroscopic, Computational, Hirshfeld Surface, Molecular Docking Investigations on 1H-Indole-3-Carbaldehyde

被引:32
|
作者
Fatima, Aysha [1 ,2 ]
Khanum, Ghazala [1 ]
Sharma, Arun [1 ]
Verma, Indresh [3 ]
Arora, Himanshu [4 ]
Siddiqui, Nazia [5 ]
Javed, Saleem [2 ]
机构
[1] Jiwaji Univ, SOS Chem, Gwalior, Madhya Pradesh, India
[2] Dr Bhimrao Ambedkar Univ, Dept Chem, Agra 282002, Uttar Pradesh, India
[3] Indian Inst Technol, Dept Chem, Kanpur, Uttar Pradesh, India
[4] GD Goenka Univ, Sch Engn & Sci, Dept Basic & Appl Sci, Gurugram, Haryana, India
[5] Dayalbagh Educ Inst Agra, USIC, Agra 282005, Uttar Pradesh, India
关键词
Optimization; vibrational analysis; hirshfeld surface; MEP; ELF; docking; EXPERIMENTAL FT-IR; ANTICANCER AGENTS; INDOLE; SCAFFOLD; RAMAN; NMR; DFT; NBO; DERIVATIVES; INHIBITORS;
D O I
10.1080/10406638.2022.2026989
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
1H-Indole-3-carbaldehyde (1H-I3A) was investigated experimentally by NMR (1H-NMR and 13 C-NMR in solution form), FT-Raman, FT-IR, UV-Visible and quantum chemically by DFT approach. 3 D and 2 D surface analysis was carried by Hirshfeld surface analysis. The B3LYP method and the 6-311++G(d,p) basis set were used to optimize the molecular structure and vibrational modes. Optimized binding parameters and experimental binding parameters are in good agreement. VEDA (Vibrational Energy Distribution analysis) successfully carried out and complete tasks for the distribution of potential energy. 1H-NMR and 13 C-NMR shifts were estimated with GIAO method and the results compared with experimental spectra. The TDDFT method and the PCM solvent model were used for the analysis of electronic properties such as UV-Vis (in the gas phase, methanol and DMSO) and compared with the experimental UV-Vis spectra. The HOMO/LUMO energy results underscore that sufficient charge transfer has taken place within the molecule. Studies of donor-acceptor connections were performed using NBO analysis. The MEP surface analysis was performed and charge distribution was demonstrated. The degree of relative localization of electrons was analyzed using the FLF diagram. The Fukui functional analysis to find possible points of attack for various substituents. Molecular electrostatic potential (MEP) was created and 3-D color representation shows reactive sites. Study of donor-acceptor interconnections were done via NBO analysis. The biological study like molecular docking was done with 7 different receptors to find the best ligand-protein interactions and drug similarities.
引用
收藏
页码:1263 / 1287
页数:25
相关论文
共 50 条
  • [21] Spectroscopic and computational characterizations, Hirshfeld surface investigations, anticancer studies and molecular docking analysis of novel NLO 3-hydroxy-3′,4′,5,7-tetramethoxyflavone
    K Nagarajan
    V Krishnakumar
    K Parimala
    Bulletin of Materials Science, 46
  • [22] Quantum chemical, spectroscopic, hirshfeld surface and molecular docking studies on 2-aminobenzothiazole
    Kumar, Mohit
    Singh, Meenakshi
    Jaiswar, Gautam
    Lalji, Ram Sunil Kumar
    Singh, Brajendra K.
    Sharma, Arun
    Khanum, Ghazala
    Fatima, Aysha
    Kumar, Anuj
    Jaipal
    Siddiqui, Nazia
    Javed, Saleem
    JOURNAL OF MOLECULAR STRUCTURE, 2022, 1253
  • [23] Molecular Dynamic, Hirshfeld Surface, Computational Quantum and Spectroscopic analysis of 4-Hydroxy-1-Naphthaldehyde
    Mir, M. Amin
    Jassal, Mms
    Andrews, Kim
    CURRENT ORGANOCATALYSIS, 2024, 11 (01) : 60 - 70
  • [24] Quantum Computational, Spectroscopic, Hirshfeld Surface Analysis of 3-Picoline (Monomer and Dimer) by DFT/TD-DFT with Different Solvents, Molecular Docking, and Molecular Dynamic Studies
    Garima, Km.
    Fatima, Aysha
    Pooja, Km.
    Savita, Sandhya
    Sharma, Manoj
    Kumar, Mohit
    Muthu, S.
    Siddiqui, Nazia
    Javed, Saleem
    POLYCYCLIC AROMATIC COMPOUNDS, 2023, 43 (09) : 7828 - 7852
  • [25] Three-Component Reaction of 1-(Oxyran-2-ylmethyl)-1H-indole-3-carbaldehyde with CH-Acids and Amines
    Suzdalev, K. F.
    Vikrishchuk, N. I.
    Tsiryulnik, S. A.
    RUSSIAN JOURNAL OF GENERAL CHEMISTRY, 2020, 90 (04) : 572 - 578
  • [26] Spectroscopic, quantum computational and molecular docking studies on 1-phenylcyclopentane carboxylic acid
    Raajaraman, B. R.
    Sheela, N. R.
    Muthu, S.
    COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2019, 82 : 44 - 56
  • [27] Synthesis, Spectroscopic, Crystal Structure, DFT, Hirshfeld Surface and Molecular Docking Analysis of Hexahydroquinoline Derivative (HQ)
    Fatima, Aysha
    Khanum, Ghazala
    Agrawal, Dau D.
    Srivastava, Sanjay K.
    Butcher, Ray J.
    Muthu, S.
    Ahmad, Musheer
    Althubeiti, Khaled
    Siddiqui, Nazia
    Javed, Saleem
    POLYCYCLIC AROMATIC COMPOUNDS, 2023, 43 (05) : 4242 - 4270
  • [28] Molecular, quantum computational, electron excitations, molecular surface properties and molecular docking studies on 3-methyl-2-phenylmorpholine
    Elamuruguporchelvi, E.
    Sangeetha, P.
    Manikandan, A.
    Javed, Saleem
    Muthu, S.
    CHEMICAL PHYSICS IMPACT, 2024, 8
  • [29] Synthesis, molecular docking of 3-(2-chloroethyl)-2,6-diphenylpiperidin-4-one: Hirshfeld surface, spectroscopic and DFT based analyses
    Kumar, Anitha
    Sambandam, Sivakumar
    Ramalingam, Arulraj
    Krishnamoorthy, Rajkumar
    Arumugam, Dhandapani
    Oyeneyin, Oluwatoba Emmanuel
    JOURNAL OF MOLECULAR STRUCTURE, 2022, 1262
  • [30] Vibrational spectroscopic investigations, molecular dynamic simulations and molecular docking studies of N′-diphenytmethylidene-5-methyl-1H-pyrazole-3-carbohydrazide
    Pillai, Renjith Raveendran
    Menon, Vidya V.
    Mary, Y. Shyma
    Armakovic, Stevan
    Armakovic, Sanja J.
    Panicker, C. Yohannan
    JOURNAL OF MOLECULAR STRUCTURE, 2017, 1130 : 208 - 222