Investigation of the expansin gene family in sugar beet (Beta vulgaris) by the genome-wide level and their expression responses under abiotic stresses

被引:1
作者
Al-Mamoori, Dima Faris Abdulkhadum [1 ]
Altunoglu, Yasemin Celik [1 ]
Horuz, Erdogan [1 ]
Kok, Busra Ozkan [1 ]
机构
[1] Kastamonu Univ, Fac Engn & Architecture, Dept Genet & Bioengn, Kastamonu, Turkiye
关键词
Sugar beet; Expansin; Genome-wide characterization; Gene expression; IDENTIFICATION; EVOLUTIONARY; SUPERFAMILY; DUPLICATION; ENVIRONMENT; MECHANISMS; TOLERANCE; REVEALS; MEMBERS;
D O I
10.1007/s42977-023-00176-1
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Sugar beet (Beta vulgaris ssp. vulgaris) is primarily used in sugar production worldwide. Expansins are a gene family of cell wall proteins effective in regulating cell wall structure. They also participate in developmental stages, including cell and leaf growth, root development, and fruit ripening. This study comprehensively characterizes the expansin gene family members found in the sugar beet genome. In addition, in silico expression analysis of sugar beet expansin genes under variable abiotic stress conditions and expression profiles of expansin genes under combined drought and heat stresses by the qRT-PCR method were evaluated in the study. A total of 31 sugar beet expansin genes were identified. BvuEXLA-02 and BvuEXLB-02 genes can have abiotic stress tolerance roles besides their roles in normal development. Determining the properties of sugar beet expansin, family members can help enable the cellulose hydrolysis mechanism and raise plant biomass. Elucidating expression profiles of the sugar beet expansin genes under variable stress conditions can support improving plant productivity. The results of the current study may also contribute to the deep understanding of sugar beet expansin genes in the future.
引用
收藏
页码:295 / 307
页数:13
相关论文
共 50 条
  • [31] Genome-Wide Characterization and Expression Analysis of bZIP Gene Family Under Abiotic Stress in Glycyrrhiza uralensis
    Han, Yuxuan
    Hou, Zhuoni
    He, Qiuling
    Zhang, Xuemin
    Yan, Kaijing
    Han, Ruilian
    Liang, Zongsuo
    FRONTIERS IN GENETICS, 2021, 12
  • [32] Genome-wide investigation of pentatricopeptide repeat gene family in poplar and their expression analysis in response to biotic and abiotic stresses
    Xing, Haitao
    Fu, Xiaokang
    Yang, Chen
    Tang, Xiaofeng
    Guo, Li
    Li, Chaofeng
    Xu, Changzheng
    Luo, Keming
    SCIENTIFIC REPORTS, 2018, 8
  • [33] Genome-wide identification, characterization, and expression patterns of the BZR transcription factor family in sugar beet (Beta vulgaris L.)
    Wang, Wei
    Sun, Ya-Qing
    Li, Guo-Long
    Zhang, Shao-Ying
    BMC PLANT BIOLOGY, 2019, 19 (1)
  • [34] Genome-wide characterization of WRKY gene family in Helianthus annuus L. and their expression profiles under biotic and abiotic stresses
    Li, Juanjuan
    Islam, Faisal
    Huang, Qian
    Wang, Jian
    Zhou, Weijun
    Xu, Ling
    Yang, Chong
    PLOS ONE, 2020, 15 (12):
  • [35] Genome-wide identification and characterization of aquaporin gene family in Beta vulgaris
    Kong, Weilong
    Yang, Shaozong
    Wang, Yulu
    Bendahmane, Mohammed
    Fu, Xiaopeng
    PEERJ, 2017, 5
  • [36] Genome-wide identification, characterization, and expression patterns of the BZR transcription factor family in sugar beet (Beta vulgaris L.)
    Wei Wang
    Ya-Qing Sun
    Guo-Long Li
    Shao-Ying Zhang
    BMC Plant Biology, 19
  • [37] Genome-wide identification of the AAT gene family in quinoa and analysis of its expression pattern under abiotic stresses
    Li, Hanxue
    Jiang, Chunhe
    Liu, Junna
    Zhang, Ping
    Li, Li
    Li, Rongbo
    Huang, Liubin
    Wang, Xuqin
    Jiang, Guofei
    Bai, Yutao
    Zhang, Lingyuan
    Qin, Peng
    BMC GENOMICS, 2025, 26 (01):
  • [38] Genome-Wide Identification and Expression Analysis of the G-Protein Gene Family in Barley Under Abiotic Stresses
    Han, Ailing
    Xu, Zhengyuan
    Cai, Zhenyu
    Zheng, Yuling
    Chen, Mingjiong
    Wu, Liyuan
    Shen, Qiufang
    PLANTS-BASEL, 2024, 13 (24):
  • [39] Genome-Wide Identification and Expression Analysis of the BvSnRK2 Genes Family in Sugar Beet (Beta vulgaris L.) Under Salt Conditions
    Wu, Guo-Qiang
    Liu, Zi-Xi
    Xie, Ling-Ling
    Wang, Jin-Long
    JOURNAL OF PLANT GROWTH REGULATION, 2021, 40 (02) : 519 - 532
  • [40] Genome-Wide Identification of the BvCBL Genes in Sugar Beet (Beta vulgaris L.) and Their Expression Under Salt and Drought Conditions
    Ling-Ling Xie
    Guo-Qiang Wu
    Min Wei
    Sha-Jia Li
    Journal of Plant Growth Regulation, 2023, 42 : 2983 - 2999