Identification of ferroptosis-associated biomarkers in Stanford type A aortic dissection based on machine learning

被引:0
|
作者
Pan, Hao [1 ]
Lu, Wei [2 ]
Liu, Zhifei [1 ]
Wang, Yu [1 ]
机构
[1] Shandong First Med Univ, Dept Anesthesiol, Shandong Prov Hosp, 324 Jingwu Rd, Jinan 250021, Shandong, Peoples R China
[2] Shandong First Med Univ, Dept Oral & Maxillofacial Surg, Shandong Prov Hosp, Jinan, Shandong, Peoples R China
来源
AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH | 2023年 / 15卷 / 05期
关键词
Stanford type A aortic dissection; ferroptosis; immune infiltration; characteristic genes; pan-cancer analysis; drug sensitivity; INTERNATIONAL REGISTRY; INFLAMMATION; OUTCOMES; DAZAP1;
D O I
暂无
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Stanford type A aortic dissection (STAAD) is a serious cardiovascular disease with a high mortality rate. Ferroptosis is closely associated with various diseases, including cardiovascular disease. However, the role of ferroptosis in the progression of STAAD remains unclear. Methods: Gene expression profiles of GSE52093, GSE98770, and GSE153434 datasets were downloaded from the Gene Expression Omnibus (GEO) database. Weighted gene co-expression network analysis (WGCNA), least absolute shrinkage and selection operator (LASSO), and support vector machine-recursive feature elimination (SVM-RFE) were performed to determine the ferroptosis-associated characteristic genes in STAAD. Receiver operating characteristic (ROC) curve analysis was performed to evaluate the diagnostic efficacy. Furthermore, immune cell infiltrations were analyzed using the CIBERSORT algorithm. Drug sensitivity analysis was conducted based on the CellMiner database. Results: A total of 65 differentially expressed ferroptosis-associated genes were screened. DAZAP1 and GABARAPL2 were identified as valuable diagnostic biomarkers for STAAD. A nomogram with high accuracy and reliability was constructed as a diagnostic tool for STAAD. Furthermore, immune infiltration analysis suggested that monocytes were higher in the STAAD group compared with the control group. DAZAP1 was positively correlated with monocytes, whereas GABARAPL2 was negatively correlated with monocytes. Pan-cancer analysis showed that DAZAP1 and GABARAPL2 were closely associated with the prognosis of various cancers. In addition, some antitumor drugs might be useful for the treatment of STAAD. Conclusion: DAZAP1 and GABARAPL2 might serve as potential diagnostic biomarkers for STAAD. Meanwhile, DAZAP1 and GABARAPL2 might be related to cancer and STAAD in terms of ferroptosis, which provides insights into developing new therapeutic approaches for STAAD.
引用
收藏
页码:3092 / +
页数:29
相关论文
共 50 条
  • [21] Identification of Hub Genes and Molecular Mechanisms in Acute Stanford Type A Aortic Dissection
    Chuai, Junbo
    Wu, Dan
    Li, Zipeng
    Chen, Wei
    Liu, Chang
    Li, Dawei
    Zhang, Chunfeng
    Zhou, Yang
    Tian, Hai
    JOURNAL OF BIOLOGICAL REGULATORS AND HOMEOSTATIC AGENTS, 2023, 37 (06): : 3221 - 3239
  • [22] Identification of a Novel Ferroptosis-Associated Gene Signature of Ulcerative Colitis
    Fu, Chong
    Cai, Wenjiao
    Zhang, Yanping
    JOURNAL OF BIOLOGICAL REGULATORS AND HOMEOSTATIC AGENTS, 2022, 36 (05): : 1717 - 1725
  • [23] Stanford type A aortic dissection with intimal intussusception
    Niino T.
    Unosawa S.
    Shimura K.
    General Thoracic and Cardiovascular Surgery, 2012, 60 (9) : 578 - 580
  • [24] Unusual presentation of a stanford type A aortic dissection
    Ataei, A.
    Benes, G.
    Destin, G.
    Etienne, J.
    Marler, A. C.
    Bank, M.
    Engel, L. S.
    Modica, M.
    AMERICAN JOURNAL OF THE MEDICAL SCIENCES, 2023, 365 : S293 - S293
  • [25] An Experimental Model of Stanford Type A Aortic Dissection
    Li, Ming
    Dong, Jianzeng
    Li, Ling
    Zhao, Xiaoyan
    JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY, 2017, 70 (16) : C3 - C3
  • [26] Role of ferroptosis-related genes in Stanford type a aortic dissection and identification of key genes: new insights from bioinformatic analysis
    Zou, Hua-Xi
    Qiu, Bai-Quan
    Lai, Song-Qing
    Huang, Huang
    Zhou, Xue-Liang
    Gong, Cheng-Wu
    Wang, Li-Jun
    Yuan, Ming-Ming
    He, An-Di
    Liu, Ji-Chun
    BIOENGINEERED, 2021, 12 (02) : 9976 - 9990
  • [27] Learning Curve of Aortic Arch Replacement Surgery in Chinese Mainland with Stanford Type A Aortic Dissection
    Sun, Yuntian
    Fan, Yunlong
    Dong, Zhaorui
    Wei, Shixiong
    Song, Chao
    HEART SURGERY FORUM, 2022, 25 (01): : E88 - E96
  • [28] Bioinformatics analysis of key genes and miRNAs associated with Stanford type A aortic dissection
    Bi, Siwei
    Liu, Ruiqi
    Shen, Yinzhi
    Gu, Jun
    JOURNAL OF THORACIC DISEASE, 2020, 12 (09) : 4842 - +
  • [29] Smaller Hospital Size is Associated With Higher Mortality in Stanford Type A Aortic Dissection
    Li, Renxi
    Luo, Qianyun
    Green, Derrick
    Huddleston, Stephen
    VASCULAR AND ENDOVASCULAR SURGERY, 2025, 59 (01) : 5 - 11
  • [30] Identification of Biomarkers Associated with Oxidative Stress in Aortic Dissection Based on Bulk Transcriptome Analyses
    Li, Zhenghao
    Li, Changying
    Shao, Yue
    Ran, Haoyu
    Shi, Haoming
    Zhou, Ruiqin
    Liu, Xuanyu
    Wu, Qingchen
    Zhang, Cheng
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2024, 17 : 5633 - 5650