A novel immune-associated prognostic signature based on the immune cell infiltration analysis for hepatocellular carcinoma

被引:15
|
作者
Lin, Xinrong [1 ]
Tian, Chuan [1 ]
Pan, Fan [1 ]
Wang, Rui [1 ]
机构
[1] Nanjing Univ, Affiliated Jinling Hosp, Med Sch, Dept Med Oncol, Nanjing, Peoples R China
基金
中国国家自然科学基金;
关键词
HCC; tumor-infiltrating immune cells; immune-related genes; risk score; bioinformatics;
D O I
10.1515/oncologie-2023-0360
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Objectives: Immune-related genes (IRGs) in hepatocellular carcinoma (HCC) are significantly associated with both tumor-infiltrating immune cells (TICs) and disease prognosis. Therefore, exploring the correlation between IRGs with HCC and its related mechanism will provide new evidence for the diagnosis and treatment of HCC.Methods: The current paper analyzed the TICs in 374 HCC samples retrieved from the TCGA-LIHC dataset using ssGSEA and divided them according to the level of immune cell. A total of 177 differentially expressed genes (DEGs) were analyzed by protein-protein interaction (PPI) networks and univariate and multivariate Cox regression analyses.Results: Four IRGs (C7, CTSV, MMP1, and VCAN) were found to be indicators of the immune prognosis for HCC according to the PPI network and Cox regression analyses of 177 DEGs, which was independently validated using an external dataset. A prognosis risk model was constructed for factors dependent on the four IRGs. Prognostic risk was associated with the subtype of infiltrating immune cells.Conclusions: Four effective IRGs were identified as novel independent prognostic factors that were correlated with tumor immune infiltration in HCC. This signature may guide the choice of immunotherapy for HCC.
引用
收藏
页码:91 / 103
页数:13
相关论文
共 50 条
  • [1] Development and validation of a prognostic immune-associated gene signature in clear cell renal cell carcinoma
    Shen, Chengquan
    Liu, Jing
    Wang, Jirong
    Zhong, Xiulong
    Dong, Dahai
    Yang, Xiaokun
    Wang, Yonghua
    INTERNATIONAL IMMUNOPHARMACOLOGY, 2020, 81
  • [2] Prognostic risk of immune-associated signature in the microenvironment of brain gliomas
    Tao, Yaling
    Zhu, Junqi
    Yu, Xiaoling
    Cong, Huaiwei
    Li, Jinpeng
    Cai, Ting
    Chen, Qian
    FRONTIERS IN GENETICS, 2023, 14
  • [3] ALYREF associated with immune infiltration is a prognostic biomarker in hepatocellular carcinoma
    Wang, Zhen-Zhen
    Meng, Tao
    Yang, Ming-Ya
    Wang, Wei
    Zhang, Yan
    Liu, Yu
    Han, An-Qi
    Wu, Jin
    Wang, Hui-xiao
    Qian, Bo
    Zhu, Li-Xin
    TRANSLATIONAL ONCOLOGY, 2022, 21
  • [4] BRCA1 Is a Novel Prognostic Indicator and Associates with Immune Cell Infiltration in Hepatocellular Carcinoma
    Mei, Jie
    Wang, Runjie
    Xia, Dandan
    Yang, Xuejing
    Zhou, Weijian
    Wang, Huiyu
    Liu, Chaoying
    DNA AND CELL BIOLOGY, 2020, 39 (10) : 1838 - 1849
  • [5] CENPO is Associated with Immune Cell Infiltration and is a Potential Diagnostic and Prognostic Marker for Hepatocellular Carcinoma
    He, Kun
    Xie, Mengyi
    Li, Jingdong
    He, Yi
    Yin, Yaolin
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2022, 15 : 7493 - 7510
  • [6] A novel risk score based on immune-related genes for hepatocellular carcinoma as a reliable prognostic biomarker and correlated with immune infiltration
    Long, Meiying
    Zhou, Zihan
    Wei, Xueyan
    Lin, Qiuling
    Qiu, Moqin
    Zhou, Yunxiang
    Chen, Peiqin
    Jiang, Yanji
    Wen, Qiuping
    Liu, Yingchun
    Li, Runwei
    Zhou, Xianguo
    Yu, Hongping
    FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [7] Development and Validation of a Novel 8 Immune Gene Prognostic Signature Based on the Immune Expression Profile for Hepatocellular Carcinoma
    Xu, Dafeng
    Wang, Yu
    Zhou, Kailun
    Wu, Jincai
    Zhang, Zhensheng
    Zhang, Jiachao
    Yu, Zhiwei
    Liu, Luzheng
    Liu, Xiangmei
    Li, Bidan
    Zheng, Jinfang
    ONCOTARGETS AND THERAPY, 2020, 13 : 8125 - 8140
  • [8] An immune subtype-related prognostic signature of hepatocellular carcinoma based on siligie-cell sequencing analysis
    Xie, Jiaheng
    Chen, Liang
    Sun, Qingmei
    Li, Haobo
    Wei, Wei
    Wu, Dan
    Hu, Yiming
    Zhu, Zhechen
    Shi, Jingping
    Wang, Ming
    AGING-US, 2022, 14 (07): : 3276 - 3292
  • [9] Novel prognostic signature based on HRAS, MAPK3 and TFRC identified to be associated with ferroptosis and the immune microenvironment in hepatocellular carcinoma
    Sun, Hanyao
    Qian, Xiyan
    Yang, Wei
    Zhou, Weizhong
    Zhou, Chungao
    Liu, Sheng
    Shi, Haibin
    Tian, Wei
    AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH, 2022, 14 (10): : 6924 - +
  • [10] Prognostic evaluation and immune infiltration analysis of five bioinformatic selected genes in hepatocellular carcinoma
    Lai, Enjiang
    Tai, Yang
    Jiang, Jingsun
    Zhao, Chong
    Xiao, Yang
    Quan, Xin
    Wu, Hao
    Gao, Jinhang
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2021, 25 (24) : 11128 - 11141