Quantitative analysis of pattern formation in a multistable model of glycolysis with diffusion

被引:1
作者
Bashkirtseva, Irina [1 ]
Pankratov, Alexander [1 ]
Ryashko, Lev [1 ]
机构
[1] Ural Fed Univ, Lenina 51, Ekaterinburg 620000, Russia
基金
俄罗斯科学基金会;
关键词
Self-organization; Multistability; Turing bifurcation; Spectral coefficients; Uncertainty quantification; Shannon entropy; OPEN SPATIAL REACTOR; BIFURCATION-ANALYSIS; HOPF-BIFURCATION; WAVES; OSCILLATIONS;
D O I
10.1016/j.physd.2023.133890
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
Motivated by the problem of uncertainty quantification in self-organization, we study a spatially extended Sel'kov-Strogatz model of glycolysis. A variety of coexisting patterns induced by the Turing instability is studied in the parametric zones where the original local model without diffusion exhibits stable equilibria or self-oscillations. A phenomenon of the suppression of homogeneous self-oscillations by diffusion with formation of stationary non-homogeneous patterns-attractors is revealed. To quantify the uncertainty in the number and modality of patterns-attractors and to perform an advanced parametric analysis, we use the spectral coefficients technique and Shannon entropy.& COPY; 2023 Elsevier B.V. All rights reserved.
引用
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页数:6
相关论文
共 28 条
[1]  
[Anonymous], 2020, SelfOrganization in Biological Systems
[2]   Turing instabilities in a glycolysis reaction-diffusion system [J].
Atabaigi, Ali .
APPLICABLE ANALYSIS, 2024, 103 (02) :377-392
[3]   Bifurcation analysis of an enzyme-catalyzed reaction-diffusion system [J].
Atabaigi, Ali ;
Barati, Ali ;
Norouzi, Hamed .
COMPUTERS & MATHEMATICS WITH APPLICATIONS, 2018, 75 (12) :4361-4377
[4]   Glycolytic oscillations and waves in an open spatial reactor:: Impact of feedback regulation of phosphofructokinase [J].
Bagyan, S ;
Mair, T ;
Dulos, E ;
Boissonade, J ;
De Kepper, P ;
Müller, SC .
BIOPHYSICAL CHEMISTRY, 2005, 116 (01) :67-76
[5]   Selkov glycolytic model with diffusion: Patterns, multistability, and stochastic transitions [J].
Bashkirtseva, Irina ;
Pankratov, Alexander .
MATHEMATICAL METHODS IN THE APPLIED SCIENCES, 2022, 45 (13) :8142-8150
[6]   Stochastic Higgins model with diffusion: pattern formation, multistability and noise-induced preference [J].
Bashkirtseva, Irina ;
Pankratov, Alexander .
EUROPEAN PHYSICAL JOURNAL B, 2019, 92 (10)
[7]   Turing Instabilities and Rotating Spiral Waves in Glycolytic Processes [J].
Cisneros-Ake, Luis A. ;
Gonzalez-Rodriguez, Juan C. ;
Gonzalez-Ramirez, Laura R. .
BULLETIN OF MATHEMATICAL BIOLOGY, 2022, 84 (09)
[8]  
Cross M., 2009, PATTERN FORMATION DY
[9]  
Field RJ., 1985, Oscillations and traveling waves in chemical systems
[10]   Dissipative structures in biological systems: bistability, oscillations, spatial patterns and waves [J].
Goldbeter, Albert .
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, 2018, 376 (2124)