Development of a genome-wide multiomic atlas of early-stage lung cancer enables identification of novel methylation biomarkers for disease detection beyond TCGA

被引:0
|
作者
Knirsh, Revital
Lam, Stephen
McGuire, Anna
Mazzone, Peter J.
Deppen, Stephen
Grogan, Eric
Maldonado, Fabien
Savin, Orna
Danan, Shacade
Zaouch, Sarah
Axelrad, Nimrod
Netanely, Dvir
Shuali, Aharona
Schnabel, Catherine A.
Wasserstrom, Adam
Frumkin, Danny
机构
关键词
D O I
10.1158/1538-7445.AM2023-3330
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
3330
引用
收藏
页数:3
相关论文
共 25 条
  • [1] Genome-wide Detection of Chimeric Transcripts in Early-stage Non-small Cell Lung Cancer
    Ilnytskyy, Yaroslav
    Petersen, Lars
    McIntyre, John B.
    Konno, Mie
    D'Silva, Adrijana
    Dean, Michelle
    Elegbede, Anifat
    Golubov, Andrey
    Kovalchuk, Olga
    Kovalchuk, Igor
    Bebb, Gwyn
    CANCER GENOMICS & PROTEOMICS, 2023, 20 (05) : 417 - 432
  • [2] Genome-wide identification of copy-number abnormalities in early stage lung cancer
    Broet, Philippe
    Camilleri-Broet, Sophie
    Zhang, Shenli
    Marco, Alifano
    Wu, Yonghui
    Regnard, Jean-Francois
    Lim, Elaine
    Tan, Patrick B.
    CANCER RESEARCH, 2006, 66 (08)
  • [3] Genome-Wide Analysis of Survival in Early-Stage Non-Small-Cell Lung Cancer
    Huang, Yen-Tsung
    Heist, Rebecca S.
    Chirieac, Lucian R.
    Lin, Xihong
    Skaug, Vidar
    Zienolddiny, Shanbeh
    Haugen, Aage
    Wu, Michael C.
    Wang, Zhaoxi
    Su, Li
    Asomaning, Kofi
    Christiani, David C.
    JOURNAL OF CLINICAL ONCOLOGY, 2009, 27 (16) : 2660 - 2667
  • [4] Genome-wide methylation profiling of rectal tumours identifies novel markers of early stage disease
    Leong, K. J.
    Tannahill, L. A.
    Wei, W.
    Caldwell, G. M.
    Jones, C. E.
    Matthews, G. M.
    Morton, D. G.
    Bach, S. P.
    BRITISH JOURNAL OF SURGERY, 2011, 98 : 13 - 13
  • [5] Multimodal analysis of genome-wide methylation, copy number aberrations, and end motif signatures enhances detection of early-stage breast cancer
    Pham, Thi Mong Quynh
    Phan, Thanh Hai
    Jasmine, Thanh Xuan
    Tran, Thuy Thi Thu
    Huynh, Le Anh Khoa
    Vo, Thi Loan
    Nai, Thi Huong Thoang
    Tran, Thuy Trang
    Truong, My Hoang
    Tran, Ngan Chau
    Nguyen, Van Thien Chi
    Nguyen, Trong Hieu
    Nguyen, Thi Hue Hanh
    Le, Nguyen Duy Khang
    Nguyen, Thanh Dat
    Nguyen, Duy Sinh
    Truong, Dinh Kiet
    Do, Thi Thanh Thuy
    Phan, Minh-Duy
    Giang, Hoa
    Nguyen, Hoai-Nghia
    Tran, Le Son
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [6] Genome-wide Association Study of Survival in Early-stage Non-Small Cell Lung Cancer
    Tang, Shaowen
    Pan, Yun
    Wang, Yi
    Hu, Lingmin
    Cao, Songyu
    Chu, Minjie
    Dai, Juncheng
    Shu, Yongqian
    Xu, Lin
    Chen, Jiaping
    Jin, Guangfu
    Hu, Zhibin
    Ma, Hongxia
    Shen, Hongbing
    ANNALS OF SURGICAL ONCOLOGY, 2015, 22 (02) : 630 - 635
  • [7] Genome-wide Association Study of Survival in Early-stage Non-Small Cell Lung Cancer
    Shaowen Tang
    Yun Pan
    Yi Wang
    Lingmin Hu
    Songyu Cao
    Minjie Chu
    Juncheng Dai
    Yongqian Shu
    Lin Xu
    Jiaping Chen
    Guangfu Jin
    Zhibin Hu
    Hongxia Ma
    Hongbing Shen
    Annals of Surgical Oncology, 2015, 22 : 630 - 635
  • [8] Novel genome-wide DNA methylation profiling reveals distinct epigenetic landscape, prognostic model and cellular composition of early-stage lung adenocarcinoma
    Gan, Junwen
    Huang, Meng
    Wang, Weishi
    Fu, Guining
    Hu, Mingyuan
    Zhong, Hongcheng
    Ye, Xin
    Cao, Qingdong
    JOURNAL OF TRANSLATIONAL MEDICINE, 2024, 22 (01)
  • [9] Identification of novel cancer target genes by combining data from the cancer genome-wide association studies (GWAS), regulatory DNA elements and The Cancer Genome Atlas (TCGA)
    Kulkarni, Diptee A.
    Guo, Karl
    Jing, Junping
    Khaladkar, Mugdha
    Song, Kijoung
    Dong, Coco
    Cooper, David
    Schwartz, Benjamin
    CANCER RESEARCH, 2018, 78 (13)
  • [10] Genome-wide sequencing for early stage lung cancer detection from plasma cell-free DNA (cfDNA): The Circulating Cancer Genome Atlas (CCGA) study.
    Oxnard, Geoffrey R.
    Maddala, Tara
    Hubbell, Earl
    Aravanis, Alex
    Zhang, Nan
    Venn, Oliver
    Valouev, Anton
    Shen, Ling
    Patel, Shilpen
    Jamshidi, Arash
    Jagadeesh, Karthik
    Gross, Samuel
    Filippova, Darya
    Beausang, John F.
    Liu, Minetta C.
    Richards, Donald A.
    Plevritis, Sylvia
    Williams, Richard Thomas
    Hartman, Anne-Renee
    Swanton, Charles
    JOURNAL OF CLINICAL ONCOLOGY, 2018, 36 (18)