Cardiovascular utility of single cell RNA-Seq

被引:1
作者
Safabakhsh, Sina [1 ,2 ,3 ]
Ma, Wei Feng [4 ,5 ]
Miller, Clint L. L. [4 ]
Laksman, Zachary [1 ,2 ,3 ]
机构
[1] Univ British Columbia, Div Cardiol, 211-1033 Davie St, Vancouver, BC V6E 1M7, Canada
[2] Univ British Columbia, Ctr Heart Lung Innovat, Vancouver, BC, Canada
[3] Univ British Columbia, Ctr Cardiovasc Innovat, Vancouver, BC, Canada
[4] Univ Virginia, Ctr Publ Hlth Genom, Dept Publ Hlth Sci, Charlottesville, VA USA
[5] Univ Virginia, Med Scientist Training Program, Charlottesville, VA USA
基金
美国国家卫生研究院;
关键词
cardiology; sequencing; single-cell; GENE-EXPRESSION; EPIDEMIOLOGY; DETERMINANT; DISEASE;
D O I
10.1097/HCO.0000000000001014
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Purpose of reviewCardiovascular diseases remain the leading causes of morbidity and mortality globally. Single-cell RNA sequencing has the potential to improve diagnostics, risk stratification, and provide novel therapeutic targets that have the potential to improve patient outcomes.Recent findingsHere, we provide an overview of the basic processes underlying single-cell RNA sequencing, including library preparation, data processing, and downstream analyses. We briefly discuss how the technique has been adapted to related medical disciplines, including hematology and oncology, with short term translational impact. We discuss potential applications of this technology within cardiology as well as recent innovative research within the field. We also discuss future directions to translate this technology to other high impact clinical areas.The use of single-cell RNA sequencing technology has made significant advancements in the field of cardiology, with ongoing growth in terms of applications and uptake. Most of the current research has focused on structural or atherosclerotic heart disease. Future areas that stand to benefit from this technology include cardiac electrophysiology and cardio-oncology.
引用
收藏
页码:193 / 200
页数:8
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