Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques

被引:7
作者
Dagne, Habtamu [1 ]
Venkatesa Prabhu, S. [2 ]
Palanivel, Hemalatha [1 ]
Yeshitila, Alazar [1 ]
Benor, Solomon [1 ,3 ,4 ]
Abera, Solomon [1 ]
Abdi, Adugna [1 ]
机构
[1] Addis Ababa Sci & Technol Univ, Coll Biol & Chem Engn, Ctr Bioproc & Biotechnol, Dept Biotechnol, POB 16417, Addis Ababa, Ethiopia
[2] Addis Ababa Sci & Technol Univ, Coll Biol & Chem Engn, Ctr Excellence Biotechnol & Bioproc, Dept Chem Engn, POB 16417, Addis Ababa, Ethiopia
[3] Addis Ababa Univ, Coll Nat & Computat Sci, Dept Plant Biol & Biodivers, Management, Addis Ababa, Ethiopia
[4] Tshwane Univ Technol, Fac Engn & Built, Dept Ind Engn, Environm, Pretoria, South Africa
关键词
Grapes; Sterilization; In vitro; Root stocks; Response surface methodology; RSM; Artificial neural networking (ANN); Genetic algorithm (GA); PLANT-TISSUE CULTURE; SILVER-NITRATE; REGENERATION; PROPAGATION; GROWTH;
D O I
10.1016/j.heliyon.2023.e18628
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional optimizing methods, the use of computational approaches through artificial intelligence-based process modeling and optimization algorithms provides a precise optimal condition for in vitro culturing. This study aimed to optimise in vitro sterilization of grape rootstock 3309C using RSM, ANN, and genetic algorithm (GA) techniques. In this context, two output responses, namely, Clean Culture and Explant Viability, were optimised using the models developed by RSM and ANN, followed by a GA, to obtain a globally optimal solution. The most influential independent factors, such as HgCl2, NaOCl, AgNO3, and immersion time, were considered input variables. The significance of the developed models was investigated with statistical and non-statistical techniques and was optimised to determine the significance of selected inputs. The optimal clean culture of 91%, and the explant viability of 89% can be obtained from 1.62% NaOCl at a 13.96 min immersion time, according to MLP-NSGAII. Sensitivity analysis revealed that the clean culture and explant viability were less sensitive to AgNO3 and more sensitive to immersion time. Results showed that the differences between the GA predicted and validation data were significant after the performance validation of predicted and optimised sterilising agents with immersion time combinations were tested. In general, GA, a potent methodology, may open the door to the development of new computational methods in plant tissue culture.
引用
收藏
页数:16
相关论文
共 51 条
[1]   Basic concepts of artificial neural network (ANN) modeling and its application in pharmaceutical research [J].
Agatonovic-Kustrin, S ;
Beresford, R .
JOURNAL OF PHARMACEUTICAL AND BIOMEDICAL ANALYSIS, 2000, 22 (05) :717-727
[2]   Sterilization protocols and the effect of plant growth regulators on callus induction and secondary metabolites production in in vitro cultures Melia azedarach L. [J].
Ahmadpoor, Fatemeh ;
Zare, Nasser ;
Asghari, Rasool ;
Sheikhzadeh, Parisa .
AMB EXPRESS, 2022, 12 (01)
[3]   Design of tissue culture media for efficient Prunus rootstock micropropagation using artificial intelligence models [J].
Alanagh, Esmaeil Nezami ;
Garoosi, Ghasem-ali ;
Haddad, Raheem ;
Maleki, Sara ;
Landin, Mariana ;
Pablo Gallego, Pedro .
PLANT CELL TISSUE AND ORGAN CULTURE, 2014, 117 (03) :349-359
[4]   Optimization of the Culture Medium Composition to Improve the Production of Hyoscyamine in Elicited Datura stramonium L. Hairy Roots Using the Response Surface Methodology (RSM) [J].
Amdoun, Ryad ;
Khelifi, Lakhdar ;
Khelifi-Slaoui, Majda ;
Amroune, Samia ;
Asch, Mark ;
Assaf-Ducrocq, Corinne ;
Gontier, Eric .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2010, 11 (11) :4726-4740
[5]   Artificial Neural Network Genetic Algorithm As Powerful Tool to Predict and Optimize In vitro Proliferation Mineral Medium for G x N15 Rootstock [J].
Arab, Mohammad M. ;
Yadollahi, Abbas ;
Shojaeiyan, Abdolali ;
Ahmadi, Hamed .
FRONTIERS IN PLANT SCIENCE, 2016, 7
[6]   Modeling and Optimizing a New Culture Medium for In Vitro Rooting of G X N15 Prunus Rootstock using Artificial Neural Network-Genetic Algorithm [J].
Arab, Mohammad Mehdi ;
Yadollahi, Abbas ;
Eftekhari, Maliheh ;
Ahmadi, Hamed ;
Akbari, Mohammad ;
Khorami, Saadat Sarikhani .
SCIENTIFIC REPORTS, 2018, 8
[7]   Sugarcane bagasse based activated carbon preparation and its adsorption efficacy on removal of BOD and COD from textile effluents: RSM based modeling, optimization and kinetic aspects [J].
Beyan S.M. ;
Prabhu S.V. ;
Sissay T.T. ;
Getahun A.A. .
Bioresource Technology Reports, 2021, 14
[8]   A Statistical Modeling and Optimization for Cr(VI) Adsorption from Aqueous Media via Teff Straw-Based Activated Carbon: Isotherm, Kinetics, and Thermodynamic Studies [J].
Beyan, Surafel Mustefa ;
Prabhu, Sundramurthy Venkatesa ;
Ambio, Temesgen Abeto ;
Gomadurai, C. .
ADSORPTION SCIENCE & TECHNOLOGY, 2022, 2022
[9]   An improvised in vitro vegetative propagation technique for Bambusa tulda: influence of season, sterilization and hormones [J].
Bhadrawale, Deepti ;
Mishra, Jay Prakash ;
Mishra, Yogeshwar .
JOURNAL OF FORESTRY RESEARCH, 2018, 29 (04) :1069-1074
[10]   A Design of Experiments (DoE) Approach Accelerates the Optimization of Copper-Mediated 18F-Fluorination Reactions of Arylstannanes [J].
Bowden, Gregory D. ;
Pichler, Bernd J. ;
Maurer, Andreas .
SCIENTIFIC REPORTS, 2019, 9 (1)