Single and multi-trait genomic prediction for agronomic traits in Euterpe edulis

被引:2
作者
Canal, Guilherme Bravim [1 ]
Valiati Barreto, Cynthia Aparecida [2 ]
Nogueira de Almeida, Francine Alves [1 ]
Zaidan, Iasmine Ramos [1 ]
do Couto, Diego Pereira [1 ]
Azevedo, Camila Ferreira [2 ]
Nascimento, Moyses [2 ]
da Silva Ferreira, Marcia Flores [1 ]
Ferreira, Adesio [1 ]
机构
[1] Univ Fed Espirito Santo, Dept Agron, Alegre, ES, Brazil
[2] Univ Fed Vicosa, Dept Stat, Vicosa, MG, Brazil
来源
PLOS ONE | 2023年 / 18卷 / 04期
关键词
PATH-ANALYSIS; SELECTION; POPULATION; YIELD;
D O I
10.1371/journal.pone.0275407
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Popularly known as jucaizeiro, Euterpe edulis has been gaining prominence in the fruit growing sector and has demanded the development of superior genetic materials. Since it is a native species and still little studied, the application of more sophisticated techniques can result in higher gains with less time. Until now, there are no studies that apply genomic prediction for this crop, especially in multi-trait analysis. In this sense, this study aimed to apply new methods and breeding techniques for the jucaizeiro, to optimize this breeding program through the application of genomic prediction. This data consisted of 275 jucaizeiro genotypes from a population of Rio Novo do Sul-ES, Brazil. The genomic prediction was performed using the multi-trait (G-BLUP MT) and single-trait (G-BLUP ST) models and the selection of superior genotypes was based on a selection index. Similar results for predictive ability were observed for both models. However, the G-BLUP ST model provided greater selection gains when compared to the G-BLUP MT. For this reason, the genomic estimated breeding values (GEBVs) from the G-BLUP ST, were used to select the six superior genotypes (UFES.A.RN.390, UFES.A.RN.386, UFES.A.RN.080, UFES.A.RN.383, UFES.S.RN.098, and UFES.S.RN.093). This was intended to provide superior genetic materials for the development of seedlings and implantation of productive orchards, which will meet the demands of the productive, industrial and consumer market.
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页数:19
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共 59 条
  • [1] Selective efficiency of genome-wide selection in Coffea canephora breeding
    Alkimim, Emilly Ruas
    Caixeta, Eveline Teixeira
    Sousa, Tiago Vieira
    Resende, Marcos Deon Vilela
    da Silva, Felipe Lopes
    Sakiyama, Ney Sussumu
    Zambolim, Laercio
    [J]. TREE GENETICS & GENOMES, 2020, 16 (03)
  • [2] Multi-Trait Genomic Prediction Improves Predictive Ability for Dry Matter Yield and Water-Soluble Carbohydrates in Perennial Ryegrass
    Arojju, Sai Krishna
    Cao, Mingshu
    Trolove, Michael
    Barrett, Brent A.
    Inch, Courtney
    Eady, Colin
    Stewart, Alan
    Faville, Marty J.
    [J]. FRONTIERS IN PLANT SCIENCE, 2020, 11
  • [3] Multi-trait Genomic Prediction Model Increased the Predictive Ability for Agronomic and Malting Quality Traits in Barley (Hordeum vulgare L.)
    Bhatta, Madhav
    Gutierrez, Lucia
    Cammarota, Lorena
    Cardozo, Fernanda
    German, Silvia
    Gomez-Guerrero, Blanca
    Pardo, Maria Fernanda
    Lanaro, Valeria
    Sayas, Mercedes
    Castro, Ariel J.
    [J]. G3-GENES GENOMES GENETICS, 2020, 10 (03): : 1113 - 1124
  • [4] Characterising a Eucalyptus cladocalyx breeding population using SNP markers
    Bush, David
    Thumma, Bala
    [J]. TREE GENETICS & GENOMES, 2013, 9 (03) : 741 - 752
  • [5] Accuracy of multi-trait genomic selection using different methods
    Calus, Mario P. L.
    Veerkamp, Roel F.
    [J]. GENETICS SELECTION EVOLUTION, 2011, 43
  • [6] The effect of bienniality on genomic prediction of yield in arabica coffee
    Carvalho, Humberto Fanelli
    Galli, Giovanni
    Ventorim Ferrao, Luis Felipe
    Almeida Nonato, Juliana Vieira
    Padilha, Lilian
    Maluf, Mirian Perez
    Ribeiro de Resende Jr, Marcio Fernando
    Guerreiro Filho, Oliveiro
    Fritsche-Neto, Roberto
    [J]. EUPHYTICA, 2020, 216 (06)
  • [7] Carvalho LMJ., 2022, FOOD SCI TECH-BRAZIL, P42
  • [8] Carvalho MS., 2020, CROP BREED APPL BIOT, P20
  • [9] Genetic structure among morphotypes of the endangered Brazilian palm Euterpe edulis Mart (Arecaceae)
    Coelho, Gislaine Mendes
    Santos, Alesandro Souza
    Pinto de Menezes, Ivandilson Pessoa
    Tarazi, Roberto
    Oliveira Souza, Fernanda Maria
    Parada Costa Silva, Maria das Gracas Conceicao
    Gaiotto, Fernanda Amato
    [J]. ECOLOGY AND EVOLUTION, 2020, 10 (12): : 6039 - 6048
  • [10] A COEFFICIENT OF AGREEMENT FOR NOMINAL SCALES
    COHEN, J
    [J]. EDUCATIONAL AND PSYCHOLOGICAL MEASUREMENT, 1960, 20 (01) : 37 - 46