Development of specific and rapid detection of human DNA by recombinase polymerase amplification assay for forensic analysis

被引:2
作者
Zheng, Yazi [1 ]
Liu, Guihong [1 ]
Wu, Qiushuo [1 ]
Tan, Mengyu [1 ]
Xue, Jiaming [1 ]
Zhang, Ranran [1 ]
Chen, Dezhi [1 ]
Xiao, Yuanyuan [1 ]
Lv, Meili [2 ]
Liao, Miao [1 ]
Qu, Shengqiu [1 ]
Liang, Weibo [1 ]
机构
[1] Sichuan Univ, West China Sch Basic Med Sci & Forens Med, Dept Forens Genet, Chengdu, Sichuan, Peoples R China
[2] Sichuan Univ, West China Sch Basic Med Sci & Forens Med, Dept Immunol, Chengdu, Sichuan, Peoples R China
基金
中国国家自然科学基金;
关键词
Recombinase polymerase amplification; Species identification; Forensic genetics; IDENTIFICATION; SEQUENCE; VALIDATION; GENE; FOOD;
D O I
10.1016/j.fsigen.2023.102903
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The determination of human-derived samples is very important in forensic investigations and case investigation in order to determine vital information on the suspect and the case. In this study, we established a recombinase polymerase amplification (RPA) assay for rapid identification of human-derived components. The sensitivity of the assay was 0.003125 ng, with excellent species specificity, and human-derived DNA could be detected in the presence of non-human-derived components at a ratio of 1:1000. Moreover, the RPA assay had a strong tolerance to inhibitors, in the presence of 800 ng/& mu;L humic acid, 400 ng/& mu;L tannic acid, and 8000 ng/& mu;L collagen. In forensic investigation, common body fluids (blood, saliva, semen, vaginal secretions) are all applicable, and the presence of DNA can be detected from samples after simple alkaline lysis, which greatly shortens the detection time. Four simulation and case samples (aged bones, aged bloodstains, hair, touch DNA) were also successfully applied. The above research results show that the RPA assay constructed in this study can be fully applied to forensic medicine to provide high sensitivity and applicability detection methods.
引用
收藏
页数:8
相关论文
共 50 条
  • [31] Development and performance evaluation of a recombinase polymerase amplification assay for the rapid detection of group B streptococcus
    Clarke, Christina
    O'Connor, Louise
    Carre-Skinner, Heather
    Piepenburg, Olaf
    Smith, Terry J.
    BMC MICROBIOLOGY, 2016, 16 : 1 - 6
  • [32] Development of a recombinase polymerase amplification combined with lateral flow dipstick assay for rapid and sensitive detection of Heterosigma akashiwo
    Wang, Bingkun
    Zhang, Chunyun
    Liu, FuQueryguo
    Li, Runqi
    Wang, Yuanyuan
    Chen, Guofu
    JOURNAL OF APPLIED PHYCOLOGY, 2021, 33 (05) : 3165 - 3178
  • [33] Specific biomarker mining and rapid detection of Burkholderia cepacia complex by recombinase polymerase amplification
    Fan, Yiling
    Wang, Shujuan
    Song, Minghui
    Zhou, Liangliang
    Liu, Chengzhi
    Yang, Yan
    Yu, Shuijing
    Yang, Meicheng
    FRONTIERS IN MICROBIOLOGY, 2023, 14
  • [34] A novel recombinase polymerase amplification assay for rapid detection of epidemic fowl adenovirus
    Zhang, Ji
    Liu, Jie
    An, Da
    Fan, Yunhao
    Cheng, Ziqiang
    Tang, Yi
    Diao, Youxiang
    POULTRY SCIENCE, 2020, 99 (12) : 6446 - 6453
  • [35] Recombinase polymerase amplification assay for rapid detection of Rift Valley fever virus
    Euler, Milena
    Wang, Yongjie
    Nentwich, Oliver
    Piepenburg, Olaf
    Hufert, Frank T.
    Weidmann, Manfred
    JOURNAL OF CLINICAL VIROLOGY, 2012, 54 (04) : 308 - 312
  • [36] A Sensitive and Rapid Assay for Mycoplasma hominis Detection Based on Recombinase Polymerase Amplification
    Chen, Xiaoying
    Wang, Yichao
    Zhu, Jie
    Zhu, Tao
    Yang, Hehui
    Miao, Leilei
    Xu, Jiajia
    Xi, Fengxiang
    Wang, Pan
    Jia, Tianjun
    Li, Zhaoyun
    CLINICAL LABORATORY, 2021, 67 (04) : 1042 - 1051
  • [37] Development and application of Recombinase Polymerase Amplification assay for detection of Bipolaris sorokiniana
    Zhao, Wei
    Chi, Yuan-kai
    Ye, Meng-di
    Wang, Tao
    Xu, A-mei
    Qi, Ren-de
    CROP PROTECTION, 2021, 145
  • [38] A recombinase polymerase amplification-based assay for rapid detection of Chlamydia psittaci
    Pang, Yanling
    Cong, Feng
    Zhang, Xinheng
    Li, Hongxin
    Chang, Yung-Fu
    Xie, Qingmei
    Lin, Wencheng
    POULTRY SCIENCE, 2021, 100 (02) : 585 - 591
  • [39] A recombinase polymerase amplification-SYBR Green I assay for the rapid and visual detection of Brucella
    Chang, Jiang
    Wang, Nan
    Zhan, Jun-Peng
    Zhang, Shi-Jun
    Zou, De-Ying
    Li, Feng
    Zhang, Ying
    Li, Yan-Song
    Hu, Pan
    Lu, Shi-Ying
    Liu, Zeng-Shan
    Ren, Hong-Lin
    FOLIA MICROBIOLOGICA, 2024, 69 (04) : 767 - 774
  • [40] Reverse transcription recombinase polymerase amplification assay for rapid detection of the cucurbit chlorotic yellows virus
    Zang, Lianyi
    Qiao, Ning
    Sun, Xiaohui
    Zhang, Xianping
    Zhao, Dan
    Li, Jintang
    Zhu, Xiaoping
    JOURNAL OF VIROLOGICAL METHODS, 2022, 300