Enhanced precision of circadian rhythm by output system

被引:0
|
作者
Kaji, Hotaka [1 ]
Mori, Fumito [1 ,2 ]
Ito, Hiroshi [1 ]
机构
[1] Kyushu Univ, Fac Design, 4-9-1 Shiobaru, Fukuoka 8158540, Japan
[2] Kyushu Univ, Educ & Res Ctr Math & Data Sci, 744 Motoka, Fukuoka 8190395, Japan
基金
日本学术振兴会;
关键词
Circadian rhythms; Fluctuations; Output system; Phase model; GENE-EXPRESSION; OSCILLATORS; PROTEIN;
D O I
10.1016/j.jtbi.2023.111621
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Circadian rhythms are biological rhythms with a period of approximately 24 h that persist even under constant conditions without daily environmental cues. The molecular circadian clock machinery generates physiological rhythms, which can be transmitted into the downstream output system. Owing to the stochastic nature of the biochemical reactions and the extracellular environment, the oscillation period of circadian rhythms exhibited by individual organisms or cells is not constant on a daily basis with variations as high as 10%, as reflected by the coefficient of variation. Although the fluctuations in the circadian rhythm are measured through a reporter system such as bioluminescence or fluorescence, which is an example of output systems, experimentally confirming whether the fluctuations found in the reporter system are the same as those in the circadian clock is challenging. This study investigated a coupled system of a circadian clock and its output system numerically and analytically, and then compared the fluctuations in the oscillation period of the two systems. We found that the amount of fluctuations in the output system is smaller than that in the circadian clock, assuming the degradation rate of the molecules responsible for the output system is a typical value for protein degradation. The results indicate that the output system can improve the accuracy of the circadian rhythm without the need for any denoising processes.
引用
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页数:8
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