Programmable synthetic biomolecular condensates for cellular control

被引:54
|
作者
Dai, Yifan [1 ,2 ]
Farag, Mina [3 ]
Lee, Dongheon [1 ]
Zeng, Xiangze [3 ]
Kim, Kyeri [1 ]
Son, Hye-in [1 ]
Guo, Xiao [1 ]
Su, Jonathan [1 ]
Peterson, Nikhil [1 ]
Mohammed, Javid [4 ]
Ney, Max [1 ]
Shapiro, Daniel Mark [1 ]
Pappu, Rohit V. [3 ]
Chilkoti, Ashutosh [1 ,2 ]
You, Lingchong [1 ,2 ]
机构
[1] Duke Univ, Pratt Sch Engn, Dept Biomed Engn, Durham, NC 27708 USA
[2] Duke Univ, Duke Ctr Quantitat Biodesign, Durham, NC 27708 USA
[3] Washington Univ St Louis, Ctr Biomol Condensates CBC, James McKelvey Sch Engn, Dept Biomed Engn, St Louis, MO USA
[4] Duke Univ, Dept Immunol, Durham, NC USA
关键词
PHASE-SEPARATION; DISORDERED PROTEINS; AROMATIC RESIDUES; SEQUENCE; BEHAVIOR; GENE; MECHANISM; DYNAMICS; BACTERIA; INSIGHTS;
D O I
10.1038/s41589-022-01252-8
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The formation of biomolecular condensates mediated by a coupling of associative and segregative phase transitions plays a critical role in controlling diverse cellular functions in nature. This has inspired the use of phase transitions to design synthetic systems. While design rules of phase transitions have been established for many synthetic intrinsically disordered proteins, most efforts have focused on investigating their phase behaviors in a test tube. Here, we present a rational engineering approach to program the formation and physical properties of synthetic condensates to achieve intended cellular functions. We demonstrate this approach through targeted plasmid sequestration and transcription regulation in bacteria and modulation of a protein circuit in mammalian cells. Our approach lays the foundation for engineering designer condensates for synthetic biology applications.
引用
收藏
页码:518 / +
页数:30
相关论文
共 50 条
  • [1] Programmable synthetic biomolecular condensates for cellular control
    Yifan Dai
    Mina Farag
    Dongheon Lee
    Xiangze Zeng
    Kyeri Kim
    Hye-in Son
    Xiao Guo
    Jonathan Su
    Nikhil Peterson
    Javid Mohammed
    Max Ney
    Daniel Mark Shapiro
    Rohit V. Pappu
    Ashutosh Chilkoti
    Lingchong You
    Nature Chemical Biology, 2023, 19 : 518 - 528
  • [2] Engineering synthetic biomolecular condensates
    Dai, Yifan
    You, Lingchong
    Chilkoti, Ashutosh
    NATURE REVIEWS BIOENGINEERING, 2023, 1 (07): : 466 - 480
  • [3] Bioengineering with synthetic biomolecular condensates
    Nature Reviews Bioengineering, 2023, 1 (7): : 457 - 457
  • [4] Influence of cellular crowding on biomolecular condensates
    Pyo, Andrew G. T.
    Wingreen, Ned S.
    BIOPHYSICAL JOURNAL, 2024, 123 (03) : 492A - 492A
  • [5] Biomolecular condensates: organizers of cellular biochemistry
    Banani, Salman F.
    Lee, Hyun O.
    Hyman, Anthony A.
    Rosen, Michael K.
    NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2017, 18 (05) : 285 - 298
  • [6] Biomolecular condensates in cellular stress and disease
    Alberti, S.
    FEBS OPEN BIO, 2024, 14 : 59 - 59
  • [7] Biomolecular condensates: organizers of cellular biochemistry
    Salman F. Banani
    Hyun O. Lee
    Anthony A. Hyman
    Michael K. Rosen
    Nature Reviews Molecular Cell Biology, 2017, 18 : 285 - 298
  • [8] Synthetic biomolecular condensates to engineer eukaryotic cells
    Reinkemeier, Christopher D.
    Lemke, Edward A.
    CURRENT OPINION IN CHEMICAL BIOLOGY, 2021, 64 : 174 - 181
  • [9] Recent advances in engineering synthetic biomolecular condensates
    Wan, Li
    Ke, Juntao
    Zhu, Yingying
    Zhang, Wenli
    Mu, Wanmeng
    BIOTECHNOLOGY ADVANCES, 2024, 77
  • [10] Biomolecular condensates regulate cellular electrochemical equilibria
    Dai, Yifan
    Zhou, Zhengqing
    Yu, Wen
    Ma, Yuefeng
    Kim, Kyeri
    Rivera, Nelson
    Mohammed, Javid
    Lantelme, Erica
    Hsu-Kim, Heileen
    Chilkoti, Ashutosh
    You, Lingchong
    CELL, 2024, 187 (21)