Anti-viral drug discovery against monkeypox and smallpox infection by natural curcumin derivatives: A Computational drug design approach

被引:8
|
作者
Akash, Shopnil [1 ]
Hossain, Arafat [2 ]
Hossain, Md. Sarowar [1 ]
Rahman, Md. Mominur [1 ]
Ahmed, Mohammad Z. Z. [3 ]
Ali, Nemat [4 ]
Valis, Martin [5 ]
Kuca, Kamil [6 ,7 ]
Sharma, Rohit [8 ]
机构
[1] Daffodil Int Univ, Fac Allied Hlth Sci, Dept Pharm, Dhaka, Bangladesh
[2] Bangabandhu Sheikh Mujibur Rahman Sci & Technol Un, Dept Biochem & Mol Biol, Gopalganj, Bangladesh
[3] King Saud Univ, Coll Pharm, Dept Pharmacognosy, Riyadh, Saudi Arabia
[4] King Saud Univ, Coll Pharm, Dept Pharmacol & Toxicol, Riyadh, Saudi Arabia
[5] Charles Univ Prague, Univ Hosp Hradec Kralove, Med Fac, Dept Neurol, Hradec Kralove, Czech Republic
[6] Univ Hradec Kralove, Fac Sci, Dept Chem, Hradec Kralove, Czech Republic
[7] Univ Hosp Hradec Kralove, Biomed Res Ctr, Hradec Kralove, Czech Republic
[8] Banaras Hindu Univ, Inst Med Sci, Fac Ayurveda, Dept Rasa Shastra & Bhaishajya Kalpana, Varanasi, Uttar Pradesh, India
来源
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY | 2023年 / 13卷
关键词
curcumin; monkeypox; smallpox virus; molecular docking; DFT; admet; molecular dynamic simulation; VIRUS-INFECTION; MOLECULAR DOCKING; ZIKA VIRUS; CANCER; CHIKUNGUNYA; PNEUMONIA; DYNAMICS; PROTOCOL; ANALOGS;
D O I
10.3389/fcimb.2023.1157627
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
BackgroundIn the last couple of years, viral infections have been leading the globe, considered one of the most widespread and extremely damaging health problems and one of the leading causes of mortality in the modern period. Although several viral infections are discovered, such as SARS CoV-2, Langya Henipavirus, there have only been a limited number of discoveries of possible antiviral drug, and vaccine that have even received authorization for the protection of human health. Recently, another virial infection is infecting worldwide (Monkeypox, and Smallpox), which concerns pharmacists, biochemists, doctors, and healthcare providers about another epidemic. Also, currently no specific treatment is available against Monkeypox. This research gap encouraged us to develop a new molecule to fight against monkeypox and smallpox disease. So, firstly, fifty different curcumin derivatives were collected from natural sources, which are available in the PubChem database, to determine antiviral capabilities against Monkeypox and Smallpox. Material and methodPreliminarily, the molecular docking experiment of fifty different curcumin derivatives were conducted, and the majority of the substances produced the expected binding affinities. Then, twelve curcumin derivatives were picked up for further analysis based on the maximum docking score. After that, the density functional theory (DFT) was used to determine chemical characterizations such as the highest occupied molecular orbital (HOMO), lowest unoccupied molecular orbital (LUMO), softness, and hardness, etc. ResultsThe mentioned derivatives demonstrated docking scores greater than 6.80 kcal/mol, and the most significant binding affinity was at -8.90 kcal/mol, even though 12 molecules had higher binding scores (-8.00 kcal/mol to -8.9 kcal/mol), and better than the standard medications. The molecular dynamic simulation is described by root mean square deviation (RMSD) and root-mean-square fluctuation (RMSF), demonstrating that all the compounds might be stable in the physiological system. ConclusionIn conclusion, each derivative of curcumin has outstanding absorption, distribution, metabolism, excretion, and toxicity (ADMET) characteristics. Hence, we recommended the aforementioned curcumin derivatives as potential antiviral agents for the treatment of Monkeypox and Smallpox virus, and more in vivo investigations are warranted to substantiate our findings.
引用
收藏
页数:18
相关论文
共 31 条
  • [1] Anti-viral drug discovery against monkeypox and smallpox infection by natural curcumin derivatives: a computational drug design approach (vol 13, 1157627, 2023)
    Akash, Shopnil
    Hossain, Arafat
    Hossain, Md. Sarowar
    Rahman, Md. Mominur
    Ahmed, Mohammad Z.
    Ali, Nemat
    Valis, Martin
    Kuca, Kamil
    Sharma, Rohit
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2023, 13
  • [2] Anti-parasitic drug discovery against Babesia microti by natural compounds: an extensive computational drug design approach
    Akash, Shopnil
    Hosen, Md. Eram
    Mahmood, Sajjat
    Supti, Sumaiya Jahan
    Kumer, Ajoy
    Sultana, Shamima
    Jannat, Sultana
    Bayil, Imren
    Nafidi, Hiba-Allah
    Bin Jardan, Yousef A.
    Mekonnen, Amare Bitew
    Bourhia, Mohammed
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2023, 13
  • [3] Drug and Anti-Viral Peptide Design to Inhibit the Monkeypox Virus by Restricting A36R Protein
    Miah, Mohammad Mohasin
    Tabassum, Nuzhat
    Zinnia, Maliha Afroj
    Islam, Abul Bashar Mir Md Khademul
    BIOINFORMATICS AND BIOLOGY INSIGHTS, 2022, 16
  • [4] Novel computational and drug design strategies for inhibition of monkeypox virus and Babesia microti: molecular docking, molecular dynamic simulation and drug design approach by natural compounds
    Akash, Shopnil
    Mir, Showkat Ahmad
    Mahmood, Sajjat
    Hossain, Saddam
    Islam, Md. Rezaul
    Mukerjee, Nobendu
    Nayak, Binata
    Nafidi, Hiba-Allah
    Bin Jardan, Yousef A.
    Mekonnen, Amare
    Bourhia, Mohammed
    FRONTIERS IN MICROBIOLOGY, 2023, 14
  • [5] Revolutionizing anti-cancer drug discovery against breast cancer and lung cancer by modification of natural genistein: an advanced computational and drug design approach
    Akash, Shopnil
    Bibi, Shabana
    Biswas, Partha
    Mukerjee, Nobendu
    Khan, Dhrubo Ahmed
    Hasan, Md. Nazmul
    Sultana, Nazneen Ahmeda
    Hosen, Md. Eram
    Jardan, Yousef A. Bin
    Nafidi, Hiba-Allah
    Bourhia, Mohammed
    FRONTIERS IN ONCOLOGY, 2023, 13
  • [6] Modified oxymatrine as novel therapeutic inhibitors against Monkeypox and Marburg virus through computational drug design approaches
    Islam, Md. Rezaul
    Biswas, Suvro
    Amena, Ummy
    Rahman, Miadur
    Islam, Shirmin
    Islam, Md. Ariful
    Saleh, Md. Abu
    Hassan, Hesham M.
    Al-Emam, Ahmed
    Zaki, Magdi E. A.
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2024, 28 (18)
  • [7] Antimalarial drug discovery against malaria parasites through haplopine modification: An advanced computational approach
    Akash, Shopnil
    Abdelkrim, Guendouzi
    Bayil, Imren
    Hosen, Md. Eram
    Mukerjee, Nobendu
    Shater, Abdullah F.
    Saleh, Fayez M.
    Albadrani, Ghadeer M.
    Al-Ghadi, Muath Q.
    Abdel-Daim, Mohamed M.
    Tok, Tugba Taskin
    JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2023, 27 (20) : 3168 - 3188
  • [8] Toward the Identification of Natural Antiviral Drug Candidates against Merkel Cell Polyomavirus: Computational Drug Design Approaches
    Asseri, Amer H.
    Alam, Md Jahidul
    Alzahrani, Faisal
    Khames, Ahmed
    Pathan, Mohammad Turhan
    Abourehab, Mohammed A. S.
    Hosawi, Salman
    Ahmed, Rubaiat
    Sultana, Sifat Ara
    Alam, Nazia Fairooz
    Alam, Nafee-Ul
    Alam, Rahat
    Samad, Abdus
    Pokhrel, Sushil
    Kim, Jin Kyu
    Ahammad, Foysal
    Kim, Bonglee
    Tan, Shing Cheng
    PHARMACEUTICALS, 2022, 15 (05)
  • [9] Recent report on indoles as a privileged anti-viral scaffold in drug discovery
    Singh, Asmita
    Bhutani, Charu
    Khanna, Pankaj
    Talwar, Sangeeta
    Singh, Sandeep Kumar
    Khanna, Leena
    EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY, 2025, 281
  • [10] Modified coptisine derivatives as an inhibitor against pathogenic Rhizomucor miehei, Mycolicibacterium smegmatis (Black Fungus), Monkeypox, and Marburg virus by molecular docking and molecular dynamics simulation-based drug design approach
    Akash, Shopnil
    Hossain, Arafat
    Mukerjee, Nobendu
    Sarker, Md. Moklesur Rahman
    Khan, Mohammad Firoz
    Hossain, Md. Jamal
    Rashid, Mohammad A.
    Kumer, Ajoy
    Ghosh, Arabinda
    Leon-Figueroa, Darwin A.
    Barboza, Joshuan J.
    Padhi, Bijaya Kumar
    Sah, Ranjit
    FRONTIERS IN PHARMACOLOGY, 2023, 14