Identification of a new risk score model based on hypoxia and EMT-related genes for predicting lung squamous cell carcinoma prognosis

被引:0
作者
Zhuang, Xiaojie [1 ]
Yu, Shuang [1 ]
Yang, Shuren [2 ]
Chen, Jinping [1 ]
Feng, Jihong [3 ,4 ,5 ,6 ]
机构
[1] Yichun Peoples Hosp, Dept Oncol, Yichun, Jiangxi, Peoples R China
[2] Yichun Univ, Dept Surg, Affiliated Hosp 2, Yichun, Jiangxi, Peoples R China
[3] Wenzhou Med Univ, Dept Tumor Radiotherapy & Chemotherapy, Affiliated Hosp 6, Wenzhou, Peoples R China
[4] Lishui Peoples Hosp, Dept Tumor Radiotherapy & Chemotherapy, Lishui, Peoples R China
[5] Wenzhou Med Univ, Dept Tumor Radiotherapy & Chemotherapy, Affiliated Hosp 6, 15,Dazhong St,Liandu Dist, Lishui 323000, Zhejiang, Peoples R China
[6] Lishui Peoples Hosp, 15,Dazhong St,Liandu Dist, Lishui 323000, Zhejiang, Peoples R China
关键词
epithelial-mesenchymal transition; hypoxia; Lung squamous cell carcinoma; prognosis; risk score model; tumor mutation burden; EPITHELIAL-MESENCHYMAL TRANSITION; CANCER; GROWTH;
D O I
10.1097/MD.0000000000035572
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
A complicated analysis of the prognostic characteristics of lung squamous cell carcinoma (LUSC) is needed. The aim of this study was to develop a risk score model to predict immunotherapeutic response and prognosis for patients with LUSC. A hypoxia and epithelial-mesenchymal transition-related risk score model was developed for prediction of LUSC. The correlation between risk score and clinical characteristics was determined. The single sample gene set enrichment analysis algorithm was utilized to determine the abundance of cell infiltration in tumor immune microenvironment in LUSC. The predictive value of risk score model in response to immunotherapy was evaluated. A hypoxia and epithelial-mesenchymal transition-related risk score model was constructed. This risk score model was correlated with the overall survival of LUSC. Patients with low-risk presented a high survival possibility. The high-risk group was involved in ECM receptor interaction, complement and coagulation cascades, intestinal immune network for IgA production. Finally, patients with low-risk score had significant clinical benefit. The risk score model was constructed to predict immunotherapeutic response and prognosis for patients with LUSC. In addition to identifying LUSC patients with poor survival, the results provide more information for the immune immunotherapy and microenvironment for LUSC.
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页数:12
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共 43 条
  • [11] Hypoxia and the extracellular matrix: drivers of tumour metastasis
    Gilkes, Daniele M.
    Semenza, Gregg L.
    Wirtz, Denis
    [J]. NATURE REVIEWS CANCER, 2014, 14 (06) : 430 - 439
  • [12] Fate-mapping post-hypoxic tumor cells reveals a ROS-resistant phenotype that promotes metastasis
    Godet, Ines
    Shin, Yu Jung
    Ju, Julia A.
    Ye, I. Chae
    Wang, Guannan
    Gilkes, Daniele M.
    [J]. NATURE COMMUNICATIONS, 2019, 10 (1)
  • [13] GSVA: gene set variation analysis for microarray and RNA-Seq data
    Haenzelmann, Sonja
    Castelo, Robert
    Guinney, Justin
    [J]. BMC BIOINFORMATICS, 2013, 14
  • [14] Lung cancer: current therapies and new targeted treatments
    Hirsch, Fred R.
    Scagliotti, Giorgio V.
    Mulshine, James L.
    Kwon, Regina
    Curran, Walter J.
    Wu, Yi-Long
    Paz-Ares, Luis
    [J]. LANCET, 2017, 389 (10066) : 299 - 311
  • [15] Bioinformatics-Led Discovery of Osteoarthritis Biomarkers and Inflammatory Infiltrates
    Hu, Xinyue
    Ni, Songjia
    Zhao, Kai
    Qian, Jing
    Duan, Yang
    [J]. FRONTIERS IN IMMUNOLOGY, 2022, 13
  • [16] Global Cancer Statistics
    Jemal, Ahmedin
    Bray, Freddie
    Center, Melissa M.
    Ferlay, Jacques
    Ward, Elizabeth
    Forman, David
    [J]. CA-A CANCER JOURNAL FOR CLINICIANS, 2011, 61 (02) : 69 - 90
  • [17] Genomic landscape and its correlations with tumor mutational burden, PD-L1 expression, and immune cells infiltration in Chinese lung squamous cell carcinoma
    Jiang, Tao
    Shi, Jinpeng
    Dong, Zhengwei
    Hou, Likun
    Zhao, Chao
    Li, Xuefei
    Mao, Beibei
    Zhu, Wei
    Guo, Xianchao
    Zhang, Henghui
    He, Ji
    Chen, Xiaoxia
    Su, Chunxia
    Ren, Shengxiang
    Wu, Chunyan
    Zhou, Caicun
    [J]. JOURNAL OF HEMATOLOGY & ONCOLOGY, 2019, 12 (1)
  • [18] The basics of epithelial-mesenchymal transition
    Kalluri, Raghu
    Weinberg, Robert A.
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 2009, 119 (06) : 1420 - 1428
  • [19] The EMT-activator Zeb1 is a key factor for cell plasticity and promotes metastasis in pancreatic cancer
    Krebs, Angela M.
    Mitschke, Julia
    Losada, Maria Lasierra
    Schmalhofer, Otto
    Boerries, Melanie
    Busch, Hauke
    Boettcher, Martin
    Mougiakakos, Dimitrios
    Reichardt, Wilfried
    Bronsert, Peter
    Brunton, Valerie G.
    Pilarsky, Christian
    Winkler, Thomas H.
    Brabletz, Simone
    Stemmler, Marc P.
    Brabletz, Thomas
    [J]. NATURE CELL BIOLOGY, 2017, 19 (05) : 518 - +
  • [20] Strategies for discovering novel cancer biomarkers through utilization of emerging technologies
    Kulasingam, Vathany
    Diamandis, Eleftherios P.
    [J]. NATURE CLINICAL PRACTICE ONCOLOGY, 2008, 5 (10): : 588 - 599