Arthrobacter caoxuetaonis sp. nov., Arthrobacter zhangbolii sp. nov. and Arthrobacter gengyunqii sp. nov., isolated from Marmota himalayana faeces from Qinghai- Tibet Plateau

被引:2
作者
Liu, Yue [1 ]
Zhang, Gui
Yang, Jing [2 ,4 ]
Cheng, Yanpeng [3 ]
Ye, Lin [1 ]
Lai, Xin-He [4 ,6 ]
Yang, Caixin [1 ]
Ma, Caiyun [1 ]
Tao, Yuanmeihui
Jin, Dong [2 ]
Lu, Shan [2 ,4 ]
Liu, Liyun [2 ]
Xu, Jianguo [1 ,2 ,5 ,7 ]
机构
[1] Shanxi Med Univ, Sch Publ Hlth, Dept Epidemiol, Taiyuan 030001, Shanxi, Peoples R China
[2] Chinese Ctr Dis Control & Prevent, Natl Inst Commun Dis Control & Prevent, State Key Lab Infect Dis Prevent & Control, Beijing 102206, Peoples R China
[3] Shandong First Med Univ, Shandong Prov Hosp, Infect Management Off, Jinan 250021, Peoples R China
[4] Chinese Acad Med Sci, Res Units Discovery Unknown Bacteria & Funct, Beijing 102206, Peoples R China
[5] Shenzhen Ctr Dis Control & Prevent, Shenzhen 518073, Peoples R China
[6] Shangqiu Normal Univ, Henan Key Lab Biomol Recognit & Sensing, Coll Chem & Chem Engn, Henan Joint Int Res Lab Chemobiosensing & Early D, Shangqiu 476000, Peoples R China
[7] Nankai Univ, Inst Publ Hlth, Tianjin 300071, Peoples R China
基金
国家重点研发计划;
关键词
Arthrobacter; Qinghai-Tibet Plateau; novel species; polyphasic taxonomic method; MULTIPLE SEQUENCE ALIGNMENT; EMENDED DESCRIPTION; MAXIMUM-LIKELIHOOD; GENUS ARTHROBACTER; TREES; MENAQUINONES; BACTERIUM; DISTANCE; STRAINS;
D O I
10.1099/ijsem.0.005742
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Six aerobic or facultative anaerobic, motile, Gram- stain- positive, catalase- positive and oxidase- negative strains (zg- Y453T, zgY324, zg-Y462T, zg-Y411, zg-Y809T and zg- Y786) were isolated from different faecal samples of Marmota himalayana from the Qinghai-Tibet Plateau. Pale yellow, round, raised and moist colonies appeared 48 h after incubation at 28 degrees C on brain-heart infusion plates supplemented with 5 % defibrinated sheep blood. According to the 16S rRNA gene sequence alignment, two strain pairs (zg- Y453T/zg-Y324 and zg-Y462T/zg- Y411) shared the highest similarities to Arthrobacter luteolus (99.5 and 99.2 %), and the other one (zg- Y809T/zg-Y786) to Arthrobacter citreus (99.5 %). Results of phylogenetic analysis based on the 16S rRNA gene and genome sequences showed that these six strains represented three separate species within the genus Arthrobacter. The average nucleotide identity and digital DNA-DNA hybridization values between the three novel type strains (zg- Y453T/ zg-Y462T/zg-Y809T) and other known species in this genus were all below respective thresholds (70.2-81.5/19.6-24.2 %, 70.6- 81.8/19.8-25.0 %, and 70.4-88.2/19.9-35.3 %). Although phylogenetically related, there were obvious chemotaxonomic and phenotypic differences: strain pair zg- Y462T/zg-Y411 had anteiso- C15: 0 as the only major fatty acid; the three novel species had different dominant quinones, MK- 8(H2) in strains zg- Y462T/zg-Y809T (74.8/81.1 %) and MK- 8(H2)/MK-9(H2) (43.1/53.0 %) in zgY453T; similarly, the ability to reduce nitrate in strains zg- Y453T and zg- Y462T could differentiate them from zg- Y809T. All strains had diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol, but differed slightly in the types of unidentified glycolipids, phospholipids and lipids. Based on the results of these polyphasic taxonomic analyses, three novel species within the genus Arthrobacter are proposed, namely Arthrobacter caoxuetaonis sp. nov. (type strain, zg- Y453T=GDMCC 1.2809T=JCM 35173T), Arthrobacter zhangbolii sp. nov. (type strain, zg- Y462T=GDMCC 1.2880T=JCM 35170T) and Arthrobacter gengyunqii sp. nov. (type strain, zg- Y809T=GDMCC 1.2808T=JCM 35168T).
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页数:2
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