A Race-Specific, DNA Methylation Analysis of Aging in Normal Rectum: Implications for the Biology of Aging and Its Relationship to Rectal Cancer

被引:6
|
作者
Devall, Matthew A. [1 ]
Sun, Xiangqing [1 ]
Eaton, Stephen [1 ]
Cooper, Gregory S. [2 ]
Willis, Joseph E. [3 ]
Weisenberger, Daniel J. [4 ]
Casey, Graham [5 ,6 ]
Li, Li [1 ,6 ]
机构
[1] Univ Virginia, Dept Family Med, Charlottesville, VA 22903 USA
[2] Case Western Reserve Univ, Univ Hosp Cleveland Med Ctr, Dept Med, Cleveland, OH 44106 USA
[3] Case Western Reserve Univ, Univ Hosp Cleveland Med Ctr, Dept Pathol, Cleveland, OH 44106 USA
[4] Univ Southern Calif, Dept Biochem & Mol Med, Los Angeles, CA 90007 USA
[5] Univ Virginia, Ctr Publ Hlth Genom, Charlottesville, VA 22908 USA
[6] Univ Virginia, Univ Virginia Comprehens Canc Ctr, Charlottesville, VA 22908 USA
关键词
rectum; colorectal cancer; DNA methylation; epigenetic aging; racial disparities; African American; aging; COLORECTAL-CANCER; AFRICAN-AMERICANS; NORMAL COLON; AGE; NORMALIZATION; SIGNATURES; PIPELINE; REVEALS; PACKAGE; DRIFT;
D O I
10.3390/cancers15010045
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Simple Summary Racial disparities exist within colorectal cancer (CRC) incidence and mortality, with African Americans (AA) exhibiting a greater risk of developing and dying from the disease than European Americans (EA). This disparity is mirrored in scientific research, where an inadequate number of omic-based studies have sought to recruit AA populations, severely limiting the scope of subsequent findings. Aberrant DNA methylation is a hallmark of CRC, with global and region-specific differences being attributed to disease subtype, pathogenesis and survival. However, studies on cancerous tissue are limited in their ability to infer risk mechanisms occurring in healthy cells. Here, we explore the effects of aging, a well-known CRC risk factor, on DNA methylation in normal rectum of AA and EA subjects. Our findings highlight an interplay between race and age that impacts DNA methylation and, potentially, rectal cancer risk. Approximately 90% of colorectal cancer (CRC) develop over the age of 50, highlighting the important role of aging in CRC risk. African Americans (AAs) shoulder a greater CRC burden than European Americans (EA) and are more likely to develop CRC at a younger age. The effects of aging in AA and EA normal rectal tissue have yet to be defined. Here, we performed epigenome-wide DNA methylation analysis in the first, large-scale biracial cohort of normal rectum (n = 140 samples). We identified increased epigenetic age acceleration in EA than AA rectum (p = 3.91 x 10(-4)) using linear regression. We also identified differentially methylated regions (DMRs) associated with chronological aging in AA and EA, separately using DMRcate. Next, a consensus set of regions associated with cancer was identified through DMR analysis of two rectal cancer cohorts. The vast majority of AA DMRs were present in our analysis of aging in rectum of EA subjects, though rates of epigenetic drift were significantly greater in AA (p = 1.94 x 10(-45)). However, 3.66-fold more DMRs were associated with aging in rectum of EA subjects, many of which were also associated with rectal cancer. Our findings reveal a novel relationship between race, age, DNA methylation and rectal cancer risk that warrants further investigation.
引用
收藏
页数:15
相关论文
共 14 条
  • [1] DNA Methylation analysis of African American colorectal cancers reveal race-specific alterations
    Buckley, David N.
    Xicola, Rosa
    Reger, Mikaeel
    Yagle, Mary K.
    Kerimoglu, Baris
    Thorne, Curtis
    Bellomo, Dante
    Padi, Megha
    Llor, Xavier
    Ellis, Nathan
    Salhia, Bodour
    CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION, 2023, 32 (12)
  • [2] DNA Methylation analysis of African American colorectal cancers reveal race-specific alterations
    Rajpara, Seeta
    Buckley, David N.
    Xicola, Rosa
    Mikaeel, Reger
    Yagle, Mary K.
    Kerimoglu, Baris
    Thorne, Curtis
    Bellomo, Dante A.
    Padi, Megha
    Llor, Xavier
    Ellis, Nathan
    Salhia, Bodour
    CANCER RESEARCH, 2024, 84 (06)
  • [3] Race-specific coregulatory and transcriptomic profiles associated with DNA methylation and androgen receptor in prostate cancer
    Ramakrishnan, Swathi
    Cortes-Gomez, Eduardo
    Athans, Sarah R.
    Attwood, Kristopher M.
    Rosario, Spencer R.
    Kim, Se Jin
    Mager, Donald E.
    Isenhart, Emily G.
    Hu, Qiang
    Wang, Jianmin
    Woloszynska, Anna
    GENOME MEDICINE, 2024, 16 (01)
  • [4] Epigenetic mechanisms underlying endometrial cancer outcomes: race-specific patterns of DNA methylation associated with molecular subtypes and survival
    Hoos, Emery
    Koval, Lauren E.
    Corcoran, David L.
    Eaves, Lauren A.
    Roell, Kyle
    Rager, Julia E.
    Tan, Xianming
    Godfrey, Sherette
    Keku, Temitope O.
    Bae-Jump, Victoria
    Olshan, Andrew F.
    Nichols, Hazel B.
    Weissman, Bernard E.
    Fry, Rebecca C.
    CARCINOGENESIS, 2025, 46 (01)
  • [5] Environmental exposures and aging are associated with tissue-specific alterations in DNA methylation at cancer-related CpG loci in normal tissues
    Christensen, Brock
    Houseman, E. Andres
    Marsit, Carmen
    Zheng, Shichun
    Wrensch, Margaret
    Wiemels, Joseph
    Nelson, Heather
    Karagas, Margaret
    Bueno, Raphael
    Sugarbaker, David
    Yeh, Ru-Fang
    Wiencke, John
    Kelsey, Karl
    CANCER RESEARCH, 2009, 69
  • [6] IMPLICATIONS OF DNA METHYLATION FOR PTSD: FROM GENE-SPECIFIC TO GENOME-WIDE AND BIOLOGICAL AGING PATTERNS
    Vukojevic, Vanja
    Milnik, Annette
    de Quervain, Dominique J. -F.
    Papassotiropoulos, Andreas
    EUROPEAN NEUROPSYCHOPHARMACOLOGY, 2017, 27 : S311 - S311
  • [7] Epigenome-wide analysis of DNA methylation reveals a rectal cancer-specific epigenomic signature
    Vymetalkova, Veronika
    Vodicka, Pavel
    Pardini, Barbara
    Rosa, Fabio
    Levy, Miroslav
    Schneiderova, Michaela
    Liska, Vaclav
    Vodickova, Ludmila
    Nilsson, Torbjorn K.
    Farkas, Sanja A.
    EPIGENOMICS, 2016, 8 (09) : 1193 - 1207
  • [8] Patterns of DNA methylation in individual colonic crypts reveal aging and cancer-related field defects in the morphologically normal mucosa
    Belshaw, Nigel J.
    Pal, Nandita
    Tapp, Henri S.
    Dainty, Jack R.
    Lewis, Michael P. N.
    Williams, Mark R.
    Lund, Elizabeth K.
    Johnson, Ian T.
    CARCINOGENESIS, 2010, 31 (06) : 1158 - 1163
  • [9] DNA methylation-based biological aging and cancer risk and survival: Pooled analysis of seven prospective studies
    Dugue, Pierre-Antoine
    Bassett, Julie K.
    Joo, JiHoon E.
    Jung, Chol-Hee
    Wong, Ee Ming
    Moreno-Betancur, Margarita
    Schmidt, Daniel
    Makalic, Enes
    Li, Shuai
    Severi, Gianluca
    Hodge, Allison M.
    Buchanan, Daniel D.
    English, Dallas R.
    Hopper, John L.
    Southey, Melissa C.
    Giles, Graham G.
    Milne, Roger L.
    INTERNATIONAL JOURNAL OF CANCER, 2018, 142 (08) : 1611 - 1619
  • [10] Quantitative Analysis of DNA Methylation Profiles in Lung Cancer Identifies Aberrant DNA Methylation of Specific Genes and Its Association with Gender and Cancer Risk Factors
    Vaissiere, Thomas
    Hung, Rayjean J.
    Zaridze, David
    Moukeria, Anush
    Cuenin, Cyrille
    Fasolo, Virgrinie
    Ferro, Gilles
    Paliwal, Anuparn
    Hainaut, Pierre
    Brennan, Paul
    Tost, Joerg
    Boffetta, Paolo
    Herceg, Zdenko
    CANCER RESEARCH, 2009, 69 (01) : 243 - 252