Nocardia australiensis sp. nov. and Nocardia spumae sp. nov., isolated from sea foam in Queensland, Australia

被引:2
|
作者
Wright, Luke [1 ]
Nouioui, Imen [2 ]
Mast, Yvonne [2 ]
Bunk, Boyke [2 ]
Sproeer, Cathrin [2 ]
Neumann-Schaal, Meina [2 ]
Wolf, Jacqueline [2 ]
Katouli, Mohammad [1 ]
Kurtboeke, D. Ipek [1 ]
机构
[1] Univ Sunshine Coast, 90 Sippy Downs Dr, Sippy Downs, Qld 4556, Australia
[2] Leibniz Inst DSMZ, German Collect Microorganisms & Cell Cultures, Inhoffenstr 7B, D-38124 Braunschweig, Germany
关键词
Nocardia; nocardiae; foaming coastal marine waters; novel; Australia; Queensland; foam; beach; DEGRADATION; ACCURATE; DATABASE; GENOMES; RUBBER; GENE;
D O I
10.1099/ijsem.0.005952
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Strains USC-21046T and USC-21048T were isolated from foaming coastal marine waters on the Sunshine Coast, Queensland, Australia. Both strains displayed growth and morphological characteristics typical for members belonging to the genus Nocar-dia. The major polar lipids were diphosphatidylglycerol and phosphatidylethanolamine, and the major fatty acids were C16:0, C18: 1 omega 9c, C18: 0 and C18:0 10 -methyl. The mycolic acids of strains USC-21046T and USC-21048T consisted of chain lengths between 50-64 and 56-68, respectively. Moreover, both of those strains contained meso- diaminopimelic acid and ribose, arabinose, glucose and galactose as whole cell sugars. Based on the phylogenomic results, both strains belonged to the genus Nocardia with strain USC-21046T showing an 80.4 % genome similarity to N. vinacea NBRC 16497T and N. pseudovaccinii NBRC 100343T, whereas USC-21048T strain showed an 83.6 % genome similarity to N. aobensis NBRC 100429T. Both strains were delineated from their closely related relatives based on physiological (e.g. growth on sole carbon source) and chemotaxonomic (e.g. cel-lular fatty composition) differences. The digital DNA-DNA hybridization (dDDH) values between USC-21046T and USC-21048T and their closely related relatives were below the dDDH threshold value of <= 70 % used for the taxonomic classification of novel species status. The genome length of strains USC-21046T and USC-21048T were 6 878 863 and 7 066 978 bp, with G+C contents of 65.2 and 67.8 mol%, respectively. For the novel isolates, we propose the names Nocardia australiensis sp. nov. with the type strain USC-21046T (=DSM 111727T=NCCB 100867T) and Nocardia spumae sp. nov. with the type strain USC-21048T (=DSM 111726T=NCCB 100868T).
引用
收藏
页数:12
相关论文
共 50 条
  • [31] Paenibacillus foliorum sp. nov., Paenibacillus phytohabitans sp. nov., Paenibacillus plantarum sp. nov., Paenibacillus planticolens sp. nov., Paenibacillus phytorum sp. nov. and Paenibacillus germinis sp. nov., isolated from the Arabidopsis thaliana phyllosphere
    Qi, Shan Shan
    Cnockaert, Margo
    Carlier, Aurelien
    Vandamme, Peter A.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (04)
  • [32] Yersinia artesiana sp. nov., Yersinia proxima sp. nov., Yersinia alsatica sp. nov., Yersina vastinensis sp. nov., Yersinia thracica sp. nov. and Yersinia occitanica sp. nov., isolated from humans and animals
    Le Guern, Anne-Sophie
    Savin, Cyril
    Angermeier, Hilde
    Bremont, Sylvie
    Clermont, Dominique
    Muhle, Estelle
    Orozova, Petya
    Najdenski, Hristo
    Pizarro-Cerda, Javier
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (10) : 5363 - 5372
  • [33] Lactobacillus yilanensis sp. nov., Lactobacillus bayanensis sp. nov., Lactobacillus keshanensis sp. nov., Lactobacillus kedongensis sp. nov., Lactobacillus baiquanensis sp. nov., Lactobacillus jidongensis sp. nov., Lactobacillus hulinensis sp. nov., Lactobacillus mishanensis sp. nov. and Lactobacillus zhongbaensis sp. nov., isolated from Chinese traditional pickle and yogurt
    Wei, Yu Xin
    Gu, Chun Tao
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (10) : 3183 - 3195
  • [34] Correction to: Nocardia terrae sp. nov., an actinomycete isolated from soil in Thailand
    Pawina Kanchanasin
    Masahiro Yuki
    Takuji Kudo
    Moriya Ohkuma
    Wongsakorn Phongsopitanun
    Somboon Tanasupawat
    Archives of Microbiology, 2021, 203 : 5275 - 5275
  • [35] Nocardia sputi sp. nov. isolated from the sputum of patients with pulmonary infection
    Wang, Xiaoxia
    Wei, Ming
    Pu, Ji
    Huang, Yuyuan
    Zhang, Sihui
    Zhou, Juan
    Wang, Licheng
    Yang, Jing
    Li, Zhenjun
    Zhu, Xiong
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (11)
  • [36] Nocardia sputorum sp. nov., an actinobacterium isolated from clinical specimens in Japan
    Hamada, Moriyuki
    Enomoto, Narumi
    Yamashita, Tomonari
    Shimojima, Masahiro
    Tanno, Daiki
    Ohana, Noboru
    Toyokawa, Masahiro
    Takahashi, Hiroki
    Yaguchi, Takashi
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (06)
  • [37] Nocardia mikamii sp. nov., isolated from human pulmonary infections in the USA
    Jannat-Khah, Deanna
    Kroppenstedt, Reiner M.
    Klenk, Hans-Peter
    Sproeer, Cathrin
    Schumann, Peter
    Lasker, Brent A.
    Steigerwalt, Arnold G.
    Hinrikson, Hans P.
    Brown, June M.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 : 2272 - 2276
  • [38] Nocardia stercoris sp. nov., a novel actinomycete isolated from the cow dung
    Zhao, Junwei
    Han, Xiaoyang
    Hu, Hailong
    Ling, Ling
    Zhang, Xue
    Guo, Xiaowei
    Wang, Xiangjing
    Xiang, Wensheng
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2020, 70 (01) : 493 - 498
  • [39] Nocardia pulmonis sp. nov., an actinomycete isolated from a patient with pulmonary infection
    Li, Fang
    Xu, Shuai
    Li, Zhenpeng
    Yue, Yuan
    Song, Jingdong
    Du, Baozhong
    Che, Yanlin
    Han, Lichao
    Qiu, Xiaotong
    Kang, Yutong
    Liu, Xueping
    Chen, Shenglin
    Li, Zhenjun
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2023, 73 (04)
  • [40] Pseudomonas piscium sp. nov., Pseudomonas pisciculturae sp. nov., Pseudomonas mucoides sp. nov. and Pseudomonas neuropathica sp. nov. isolated from rainbow trout
    Duman, Muhammed
    Mulet, Magdalena
    Altun, Soner
    Saticioglu, Izzet Burcin
    Gomila, Margarita
    Lalucat, Jorge
    Garcia-Valdes, Elena
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (03)