Effects of spectral density on the azide vibrational transition in water versus D2O

被引:3
作者
Hassani, Majid [1 ]
Moore, Derek C. [1 ]
Roberson, Matthew G. [1 ]
Kashid, Somnath [1 ]
Tucker, Matthew J. [1 ]
机构
[1] Univ Nevada, Dept Chem, Reno, NV 89557 USA
关键词
Azide probe; Vibrational reporter; Vibrational lifetimes; Spectral density; 2D IR SPECTROSCOPY; LOCAL PROTEIN ENVIRONMENTS; ENZYME DYNAMICS; ACTIVE-SITE; RELAXATION; PROBE; AZIDOHOMOALANINE; REPORTERS; DIFFUSION; PEPTIDES;
D O I
10.1016/j.cplett.2023.140723
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Water and D2O have distinct spectral densities resulting from isotopic shifts associated with their vibrational manifold. Two-dimensional infrared, pump-probe, and transient grating spectroscopies were employed to directly measure the vibrational dynamics for the azide transition of NaN3 within solutions of water and D2O. Although the frequency correlation time revealed minimal variation, a linear correlation between lifetime and the optical density of the solvent background was uncovered. Thus, a predictive model of the lifetime was proposed. These findings highlight the importance of spectral density of the solvent and its role in the pathways of energy dissipation for vibrational probes.
引用
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页数:6
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共 49 条
  • [11] Two-dimensional infrared spectra reveal relaxation of the nonnucleoside inhibitor TMC278 complexed with HIV-1 reverse transcriptase
    Fang, Chong
    Bauman, Joseph D.
    Das, Kalyan
    Remorino, Amanda
    Arnold, Eddy
    Hochstrasser, Robin M.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (05) : 1472 - 1477
  • [12] Dynamics of Water at the Interface in Reverse Micelles: Measurements of Spectral Diffusion with Two-Dimensional Infrared Vibrational Echoes
    Fenn, Emily E.
    Wong, Daryl B.
    Giammanco, Chiara H.
    Fayer, M. D.
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2011, 115 (40) : 11658 - 11670
  • [13] A direct comparison of azide and nitrile vibrational probes
    Gai, Xin Sonia
    Coutifaris, Basil A.
    Brewer, Scott H.
    Fenlon, Edward E.
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2011, 13 (13) : 5926 - 5930
  • [14] Using nitrile-derivatized amino acids as infrared probes of local environment
    Getahun, Z
    Huang, CY
    Wang, T
    De León, B
    DeGrado, WF
    Gai, F
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (02) : 405 - 411
  • [15] Watching Proteins Wiggle: Mapping Structures with Two Dimensional Infrared Spectroscopy
    Ghosh, Ayanjeet
    Ostrander, Joshua S.
    Zanni, Martin T.
    [J]. CHEMICAL REVIEWS, 2017, 117 (16) : 10726 - 10759
  • [16] 2D IR Spectroscopy of Histidine: Probing Side-Chain Structure and Dynamics via Backbone Amide Vibrations
    Ghosh, Ayanjeet
    Tucker, Matthew J.
    Gai, Feng
    [J]. JOURNAL OF PHYSICAL CHEMISTRY B, 2014, 118 (28) : 7799 - 7805
  • [17] Identification of Arginine Residues in Peptides by 2D-IR Echo Spectroscopy
    Ghosh, Ayanjeet
    Tucker, Matthew J.
    Hochstrasser, Robin M.
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2011, 115 (34) : 9731 - 9738
  • [18] Inhibition of vibrational energy flow within an aromatic scaffold via heavy atom effect
    Hassani, Majid
    Mallon, Christopher J. J.
    Monzy, Judith N. N.
    Schmitz, Andrew J. J.
    Brewer, Scott H. H.
    Fenlon, Edward E. E.
    Tucker, Matthew J. J.
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2023, 158 (22)
  • [19] Helix formation via conformation diffusion search
    Huang, CY
    Getahun, Z
    Zhu, YJ
    Klemke, JW
    DeGrado, WF
    Gai, F
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (05) : 2788 - 2793
  • [20] Phase-Resolved Heterodyne-Detected Transient Grating Enhances the Capabilities of 2D IR Echo Spectroscopy
    Jin, Geun Young
    Kim, Yung Sam
    [J]. JOURNAL OF PHYSICAL CHEMISTRY A, 2017, 121 (05) : 1007 - 1011