Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II

被引:1
|
作者
Marzano, Flaviana [1 ]
Chiara, Matteo [2 ]
Consiglio, Arianna [3 ]
D'Amato, Gabriele [4 ]
Gentile, Mattia [5 ]
Mirabelli, Valentina [3 ]
Piane, Maria [6 ]
Savio, Camilla [7 ]
Fabiani, Marco [8 ]
D'Elia, Domenica [3 ]
Sbisa, Elisabetta [3 ]
Scarano, Gioacchino [9 ]
Lonardo, Fortunato [9 ]
Tullo, Apollonia [1 ]
Pesole, Graziano [1 ,10 ]
Faienza, Maria Felicia [11 ]
机构
[1] IBIOM CNR, Inst Biomembranes Bioenerget & Mol Biotechnol, I-70126 Bari, Italy
[2] Univ Milan, Dept Biosci, I-20133 Milan, Italy
[3] ITB CNR, Inst Biomed Technol, I-70126 Bari, Italy
[4] Di Venere Hosp, Neonatal Intens Care Unit, I-70012 Bari, Italy
[5] ASL Bari, Med Genet Unit, I-70012 Bari, Italy
[6] Sapienza Univ, Dept Clin & Mol Med, I-00185 Rome, Italy
[7] St Andrea Univ Hosp, I-00185 Rome, Italy
[8] Sapienza Univ Rome, Dept Expt Med, I-00185 Rome, Italy
[9] Hosp G Rummo, Med Genet Unit, AORN San Pio, I-82100 Benevento, Italy
[10] Univ Bari Aldo Moro, Dept Biosci Biotechnol & Biofarmaceut, I-70126 Bari, Italy
[11] Univ A Moro Bari, Dept Precis & Regenerat Med & Ionian Area, Pediat Sect, I-70124 Bari, Italy
关键词
ES; RNA-Seq; MOPDII; Majewski; pathogenic variants; MOPD-II; PERICENTRIN; DATABASE; EXPRESSION; DIAGNOSIS; IGFBP3;
D O I
10.3390/ijms241512291
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Microcephalic Osteodysplastic Primordial Dwarfism type II (MOPDII) represents the most common form of primordial dwarfism. MOPD clinical features include severe prenatal and postnatal growth retardation, postnatal severe microcephaly, hypotonia, and an increased risk for cerebrovascular disease and insulin resistance. Autosomal recessive biallelic loss-of-function genomic variants in the centrosomal pericentrin (PCNT) gene on chromosome 21q22 cause MOPDII. Over the past decade, exome sequencing (ES) and massive RNA sequencing have been effectively employed for both the discovery of novel disease genes and to expand the genotypes of well-known diseases. In this paper we report the results both the RNA sequencing and ES of three patients affected by MOPDII with the aim of exploring whether differentially expressed genes and previously uncharacterized gene variants, in addition to PCNT pathogenic variants, could be associated with the complex phenotype of this disease. We discovered a downregulation of key factors involved in growth, such as IGF1R, IGF2R, and RAF1, in all three investigated patients. Moreover, ES identified a shortlist of genes associated with deleterious, rare variants in MOPDII patients. Our results suggest that Next Generation Sequencing (NGS) technologies can be successfully applied for the molecular characterization of the complex genotypic background of MOPDII.
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页数:14
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