First complete mitochondrial genome of the Alashan ground squirrel (Spermophilus alashanicus) (Rodentia: Sciuridae) from Ningxia, China

被引:0
|
作者
Zhao, Yao [1 ]
Liang, Jun [2 ]
Li, Jingyao [2 ]
Zhang, Zhirong [1 ]
Sun, Yue [1 ]
Liu, Fubin [1 ]
Zhang, Xu [1 ]
Liang, Yongliang [2 ]
Teng, Liwei [1 ,3 ]
Liu, Zhensheng [1 ,3 ]
机构
[1] Northeast Forestry Univ, Coll Wildlife & Protected Area, Harbin 150040, Peoples R China
[2] Ningxia Helan Mt Natl Nat Reserve Adm, Yinchuan 750021, Peoples R China
[3] Natl Forestry & Grassland Adm, Key Lab Conservat Biol, Harbin, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2024年 / 9卷 / 01期
基金
中国国家自然科学基金;
关键词
Mitogenome; Helan Mountain; phylogeny; Spermophilus alashanicus; MARMOTA-HIMALAYANA RODENTIA; DAURICUS; PHYLOGENY; CITELLUS; BUCHNER;
D O I
10.1080/23802359.2024.2305406
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The Alashan ground squirrel (Spermophilus alashanicus) is primarily distributed in the regions of Inner Mongolia and Ningxia, China. In this study, we present the first complete mitochondrial genome of S. alashanicus. The genome spans 16,464 base pairs and comprises 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a single control region with a marked AT bias. The overall GC content is 35.4%. Phylogenetic analyses indicate that S. alashanicus clusters are closely associated with S. dauricus. This comprehensive characterization of the S. alashanicus mitochondrial genome serves as a foundational resource for future studies on mitochondrial evolution, species identification, population genomics, and phylogenetics.
引用
收藏
页码:148 / 152
页数:5
相关论文
共 50 条
  • [1] The complete mitochondrial genome of endemic Taurus ground squirrel Spermophilus taurensis (Rodentia: Sciuridae)
    Matrosova, Vera A.
    Guenduez, Islam
    Ermakov, Oleg A.
    Demirtas, Saddk
    Simonov, Evgeniy
    RUSSIAN JOURNAL OF THERIOLOGY, 2023, 22 (02): : 97 - 101
  • [2] Species affiliation of the complete mitochondrial genome of Daurian ground squirrel Spermophilus dauricus Brandt, 1843 (Rodentia, Sciuridae)
    Kapustina, Svetlana
    Brandler, Oleg
    MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (01): : 296 - 297
  • [3] Exploring Alashan Ground Squirrel (Spermophilus alashanicus) Diversity: Metagenomic and Transcriptomic Datasets from the Helan Mountains
    Zhao, Yao
    Deng, Siwei
    Zhang, Zhirong
    Chen, Junda
    Teng, Liwei
    Liu, Zhensheng
    SCIENTIFIC DATA, 2024, 11 (01)
  • [4] First mitochondrial genome of the Caucasian squirrel Sciurus anomalus (Rodentia, Sciuridae)
    Boukhdoud, Liliane
    Parker, Lillian D.
    Mcinerney, Nancy Rotzel
    Saliba, Carole
    Kahale, Rhea
    Cross, Hugh
    Matisoo-Smith, Elizabeth
    Maldonado, Jesus E.
    Bou Dagher Kharrat, Magda
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (03): : 883 - 885
  • [5] Phylogeography of the European ground squirrel, Spermophilus citellus (Rodentia: Sciuridae), in the Balkans
    Rammou, Dimitra-Lida
    Karaiskou, Nikoleta
    Minoudi, Styliani
    Kazilas, Christos
    Moulistanos, Aristotelis
    Gkagkavouzis, Konstantinos
    Cirovic, Dusko
    Nikolic, Tijana
    Cosic, Nada
    Youlatos, Dionisios
    Triantafyllidis, Alexandros
    BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 2023, 139 (02) : 158 - 172
  • [6] The complete mitochondrial genome of Daurian ground squirrel, Spermophilus dauricus
    Jin, Guang-Yao
    Huang, Hai-Jiao
    Zhang, Ming-Hai
    MITOCHONDRIAL DNA PART A, 2016, 27 (04) : 2848 - 2849
  • [7] AGONISTIC BEHAVIOR OF THE RUSSET GROUND SQUIRREL (SPERMOPHILUS MAJOR, RODENTIA, SCIURIDAE)
    Titov, S. V.
    Shmyrov, A. A.
    Kuzmin, A. A.
    Ermakov, O. A.
    ZOOLOGICHESKY ZHURNAL, 2008, 87 (09): : 1124 - 1133
  • [8] Complete mitochondrial genome of the Pallas's squirrel Callosciurus erythraeus (Rodentia: Sciuridae)
    Hu, Lanlin
    Peng, Rui
    Zou, Fangdong
    MITOCHONDRIAL DNA PART A, 2016, 27 (03) : 1850 - 1851
  • [9] Complete mitochondrial genome of maritime striped squirrel Tamiops maritimus (Rodentia: Sciuridae)
    Cong, Haiyan
    Kong, Lingming
    Motokawa, Masaharu
    Wang, Wenquan
    Li, Yuchun
    MITOCHONDRIAL DNA PART A, 2017, 28 (1-2) : 240 - 241
  • [10] Complete mitochondrial genome of the black giant squirrel Ratufa bicolor (Rodentia: Sciuridae)
    Kong, Lingming
    Wang, Wenquan
    Cong, Haiyan
    Liu, Zexin
    Li, Yuchun
    MITOCHONDRIAL DNA, 2015, 26 (05): : 759 - 760