Alternative Polyadenylation Is a Novel Strategy for the Regulation of Gene Expression in Response to Stresses in Plants

被引:7
作者
Wu, Jing [1 ]
Ma, Ligeng [1 ]
Cao, Ying [1 ]
机构
[1] Capital Normal Univ, Coll Life Sci, Beijing 100048, Peoples R China
基金
中国国家自然科学基金;
关键词
gene expression; alternative polyadenylation; stress response; plants; 3' UNTRANSLATED REGIONS; END-PROCESSING FACTOR; POLY(A) POLYMERASE; CONTAINS HOMOLOGS; COLD-ACCLIMATION; STRUCTURAL BASIS; MESSENGER-RNAS; MUTANTS REVEAL; CSTF COMPLEX; SR PROTEINS;
D O I
10.3390/ijms24054727
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Precursor message RNA requires processing to generate mature RNA. Cleavage and polyadenylation at the 3 '-end in the maturation of mRNA is one of key processing steps in eukaryotes. The polyadenylation (poly(A)) tail of mRNA is an essential feature that is required to mediate its nuclear export, stability, translation efficiency, and subcellular localization. Most genes have at least two mRNA isoforms via alternative splicing (AS) or alternative polyadenylation (APA), which increases the diversity of transcriptome and proteome. However, most previous studies have focused on the role of alternative splicing on the regulation of gene expression. In this review, we summarize the recent advances concerning APA in the regulation of gene expression and in response to stresses in plants. We also discuss the mechanisms for the regulation of APA for plants in the adaptation to stress responses, and suggest that APA is a novel strategy for the adaptation to environmental changes and response to stresses in plants.
引用
收藏
页数:15
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共 119 条
  • [1] Transcription Recovery after DNA Damage Requires Chromatin Priming by the H3.3 Histone Chaperone HIRA
    Adam, Salome
    Polo, Sophie E.
    Almouzni, Genevieve
    [J]. CELL, 2013, 155 (01) : 94 - 106
  • [2] Revisiting Criteria for Plant MicroRNA Annotation in the Era of Big Data
    Axtell, Michael J.
    Meyers, Blake C.
    [J]. PLANT CELL, 2018, 30 (02) : 272 - 284
  • [3] SARS-CoV-2 Disrupts Splicing, Translation, and Protein Trafficking to Suppress Host Defenses
    Banerjee, Abhik K.
    Blanco, Mario R.
    Bruce, Emily A.
    Honson, Drew D.
    Chen, Linlin M.
    Chow, Amy
    Bhat, Prashant
    Ollikainen, Noah
    Quinodoz, Sofia A.
    Loney, Colin
    Thai, Jasmine
    Miller, Zachary D.
    Lin, Aaron E.
    Schmidt, Madaline M.
    Stewart, Douglas G.
    Goldfarb, Daniel
    De Lorenzo, Giuditta
    Rihn, Suzannah J.
    Voorhees, Rebecca M.
    Botten, Jason W.
    Majumdar, Devdoot
    Guttman, Mitchell
    [J]. CELL, 2020, 183 (05) : 1325 - +
  • [4] Determinants and dynamics of genome accessibility
    Bell, Oliver
    Tiwari, Vijay K.
    Thomae, Nicolas H.
    Schuebeler, Dirk
    [J]. NATURE REVIEWS GENETICS, 2011, 12 (08) : 554 - 564
  • [5] Experimental Genome-Wide Determination of RNA Polyadenylation in Chlamydomonas reinhardtii
    Bell, Stephen A.
    Shen, Chi
    Brown, Alishea
    Hunt, Arthur G.
    [J]. PLOS ONE, 2016, 11 (01):
  • [6] Alternative 3′ UTRs act as scaffolds to regulate membrane protein localization
    Berkovits, Binyamin D.
    Mayr, Christine
    [J]. NATURE, 2015, 522 (7556) : 363 - +
  • [7] Analysis of resistance gene-mediated defense responses in Arabidopsis thaliana plants carrying a mutation in CPR5
    Boch, J
    Verbsky, ML
    Robertson, TL
    Larkin, JC
    Kunkel, BN
    [J]. MOLECULAR PLANT-MICROBE INTERACTIONS, 1998, 11 (12) : 1196 - 1206
  • [8] The Polyadenylation Factor Subunit CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR30: A Key Factor of Programmed Cell Death and a Regulator of Immunity in Arabidopsis
    Bruggeman, Quentin
    Garmier, Marie
    de Bont, Linda
    Soubigou-Taconnat, Ludivine
    Mazubert, Christelle
    Benhamed, Moussa
    Raynaud, Cecile
    Bergounioux, Catherine
    Delarue, Marianne
    [J]. PLANT PHYSIOLOGY, 2014, 165 (02) : 732 - 746
  • [9] Root Hair Single Cell Type Specific Profiles of Gene Expression and Alternative Polyadenylation Under Cadmium Stress
    Cao, Jingyi
    Ye, Congting
    Hao, Guijie
    Dabney-Smith, Carole
    Hunt, Arthur G.
    Li, Qingshun Q.
    [J]. FRONTIERS IN PLANT SCIENCE, 2019, 10
  • [10] Wide-ranging transcriptome remodelling mediated by alternative polyadenylation in response to abiotic stresses in Sorghum
    Chakrabarti, Manohar
    de Lorenzo, Laura
    Abdel-Ghany, Salah E.
    Reddy, Anireddy S. N.
    Hunt, Arthur G.
    [J]. PLANT JOURNAL, 2020, 102 (05) : 916 - 930