EPYC functions as a novel prognostic biomarker for pancreatic cancer

被引:2
|
作者
Yang, Zhen [1 ,2 ]
Li, Honglin [3 ]
Hao, Jie [4 ]
Mei, Hanwei [2 ,5 ]
Qiu, Minghan [2 ,5 ]
Wang, Huaqing [2 ,5 ]
Gao, Ming [4 ]
机构
[1] Nankai Univ, Tianjin Union Med Ctr, Dept Clin Lab, Tianjin, Peoples R China
[2] Nankai Univ, Inst Translat Med, Tianjin Union Med Ctr, Tianjin, Peoples R China
[3] Peoples Hosp Gaoping Dist, Dept Clin Lab, Nanchong, Sichuan, Peoples R China
[4] Nankai Univ, Dept Thyroid & Breast Surg, Tianjin Union Med Ctr, Tianjin Key Lab Gen Surg Construction, Tianjin, Peoples R China
[5] Nankai Univ, Dept Oncol, Tianjin Union Med Ctr, Tianjin, Peoples R China
基金
中国国家自然科学基金;
关键词
GENES; EPIPHYCAN; DIAGNOSIS; AXIS;
D O I
10.1038/s41598-024-51478-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Pancreatic cancer (PC) has become a worldwide challenge attributed to its difficult early diagnosis and rapid progression. Treatments continue to be limited besides surgical resection. Hence, we aimed to discover novel biological signatures as clinically effective therapeutic targets for PC via the mining of public tumor databases. We found that epiphycan (EPYC) could function as an independent risk factor to predict the poor prognosis in PC based on integrated bioinformatics analysis. We downloaded associated PC data profiles from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) online websites, then applied the software Rstudio to filter out genes under the strict criteria. After the batch survival analysis using Log-rank test and univariate cox regression, we obtained 39 candidate genes. Subsequently, we narrowed the scope to 8 genes by establishing a Lasso regression model. Eventually, we focused on 2 genes (EPYC and MET) by further building a multivariate cox regression model. Given that the role of EPYC in PC remains obscure, we then performed a series of molecular functional experiments, including RT-qPCR, CCK8, EdU, colony formation, Transwell, western blot, cell live-dead staining, subcutaneous tumor formation, to enhance our insight into its underlying molecular mechanisms. The above results demonstrated that EPYC was highly expressed in PC cell lines and could promote the proliferation of PCs via PI3K-AKT signaling pathway in vivo and in vitro. We arrived at a conclusion that EPYC was expected to be a biological neo-biomarker for PC followed by being a potential therapeutic target.
引用
收藏
页数:18
相关论文
共 50 条
  • [1] Serum APN/CD13 as a novel diagnostic and prognostic biomarker of pancreatic cancer
    Pang, Li
    Zhang, Nan
    Xia, Yan
    Wang, Dawei
    Wang, Guoqing
    Meng, Xiangwei
    ONCOTARGET, 2016, 7 (47) : 77854 - 77864
  • [2] Preoperative Serum Thymidine Kinase Activity as Novel Monitoring, Prognostic, and Predictive Biomarker in Pancreatic Cancer
    Felix, Klaus
    Hinz, Ulf
    Dobiasch, Sophie
    Hackert, Thilo
    Bergmann, Frank
    Neumuller, Magnus
    Gronowitz, Simon
    Bergqvist, Mattias
    Strobel, Oliver
    PANCREAS, 2018, 47 (01) : 72 - 79
  • [3] AQP5 Is a Novel Prognostic Biomarker in Pancreatic Adenocarcinoma
    Chen, Guo
    Song, Haiyang
    Yang, Zelong
    Du, Tianshu
    Zheng, Yu
    Lu, Zifan
    Zhang, Kunpeng
    Wei, Di
    FRONTIERS IN ONCOLOGY, 2022, 12
  • [4] Role of TFRC as a Novel Prognostic Biomarker and in Immunotherapy for Pancreatic Carcinoma
    Yang, Cheng
    Li, Junqiang
    Guo, Yongdong
    Gan, Dongxue
    Zhang, Chao
    Wang, Ronglin
    Hua, Lei
    Zhu, Liaoliao
    Ma, Peixiang
    Shi, Jingjie
    Li, Shanshan
    Su, Haichuan
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 9
  • [5] Plectin-1 as a Novel Biomarker for Pancreatic Cancer
    Bausch, Dirk
    Thomas, Stephanie
    Mino-Kenudson, Mari
    Fernandez-del Castillo, Carlos
    Bauer, Todd W.
    Williams, Mark
    Warshaw, Andrew L.
    Thayer, Sarah P.
    Kelly, Kimberly A.
    CLINICAL CANCER RESEARCH, 2011, 17 (02) : 302 - 309
  • [6] Identification of cystatin SN as a novel biomarker for pancreatic cancer
    Jiang, Jie
    Liu, Hui-Ling
    Liu, Zhi-Hao
    Tan, Si-Wei
    Wu, Bin
    TUMOR BIOLOGY, 2015, 36 (05) : 3903 - 3910
  • [7] Discovery and Validation of Circulating EVL mRNA as a Prognostic Biomarker in Pancreatic Cancer
    Du, Yan
    Yao, Kai
    Feng, Qingbo
    Mao, Feiyu
    Xin, Zechang
    Xu, Peng
    Yao, Jie
    JOURNAL OF ONCOLOGY, 2021, 2021
  • [8] ITGA3 serves as a diagnostic and prognostic biomarker for pancreatic cancer
    Jiao, Yan
    Li, Yanqing
    Liu, Songyang
    Chen, Qingmin
    Liu, Yahui
    ONCOTARGETS AND THERAPY, 2019, 12 : 4141 - 4152
  • [9] CircRNA: functions and properties of a novel potential biomarker for cancer
    Meng, Shujuan
    Zhou, Hecheng
    Feng, Ziyang
    Xu, Zihao
    Tang, Ying
    Li, Peiyao
    Wu, Minghua
    MOLECULAR CANCER, 2017, 16
  • [10] CEACAM1, a novel serum biomarker for pancreatic cancer
    Simeone, Diane M.
    Ji, Baoan
    Banerjee, Mousumi
    Arumugam, Thiruvengadam
    Li, Dawei
    Anderson, Michelle A.
    Bamberger, Ann Marie
    Greenson, Joel
    Brand, Randal E.
    Ramachandran, ViJaya
    Logsdon, Craig D.
    PANCREAS, 2007, 34 (04) : 436 - 443