Comprehensive analysis of the RNA transcriptome expression profiles and construction of the ceRNA network in heart failure patients with sacubitril/valsartan therapeutic heterogeneity after acute myocardial infarction

被引:5
作者
Su, Jia [1 ,2 ]
Hu, Yingchu [1 ,2 ]
Cheng, Ji [3 ]
Li, Zhenwei [1 ,2 ]
Li, Jiyi [4 ]
Zheng, Nan [5 ]
Zhang, Zhaoxia [1 ,2 ]
Yang, Jin [6 ]
Li, Xiaojin [7 ]
Yu, Qinglin [7 ]
Du, Weiping [1 ,2 ]
Chen, Xiaomin [1 ,2 ]
机构
[1] Ningbo No 1 Hosp, Dept Cardiol, Ningbo, Zhejiang, Peoples R China
[2] Key Lab Precis Med Atherosclerot Dis Zhejiang Prov, Zhejiang, Peoples R China
[3] Univ Chinese Acad Sci, HwaMei Hosp, Dept Emergency, Ningbo, Zhejiang, Peoples R China
[4] Yuyao Peoples Hosp Zhejiang Prov, Dept Cardiol, Yuyao, Zhejiang, Peoples R China
[5] Univ Chinese Acad Sci, HwaMei Hosp, Dept Cardiol, Ningbo, Zhejiang, Peoples R China
[6] Ningbo No 1 Hosp, Dept Geriatr, Ningbo, Zhejiang, Peoples R China
[7] Ningbo No 1 Hosp, Dept Tradit Chinese Internal Med, Ningbo, Zhejiang, Peoples R China
关键词
RNA transcriptome; Sacubitril; valsartan; Heterogeneity; ceRNA; Heart failure; NORMALIZATION; PLASMA;
D O I
10.1016/j.ejphar.2023.175547
中图分类号
R9 [药学];
学科分类号
1007 ;
摘要
Sacubitril/valsartan has a noteworthy advantage in improving ventricular remodelling, as well as reducing cardiovascular mortality and the rate of heart failure (HF) readmission. However, clinically, some patients with HF still have low sensitivity to sacubitril/valsartan, indicating sacubitril/valsartan resistance (SVR). A total of 46 patients with HF after AMI (23 SVR and 23 non-sacubitril/valsartan resistance (NSVR)) were selected. Five SVR and 5 matched NSVR samples were screened for differentially expressed ncRNAs along with mRNAs. A total of 124 differentially expressed miRNAs, 137 circRNAs, 237 lncRNAs and 50 mRNAs were screened by RNA sequencing technology. After quantitative real-time PCR (qRT-PCR) verification of selected biomarkers in 18 pairs of samples, we found that for patients with SVR, hsa-miR-543, hsa-miR-642b-5p, hsa-miR-760, hsa_circ_0137499, ENST 00000474394, ENST00000528337, E2F1, NEAT1, and YTHDF2 were upregulated, and hsa-miR-424-5p, hsa-miR21-3p, hsa_circRNA_0003275, hsa_circRNA_0004494, hsa_circ_0093522, ENST00000467951, ENST000 00558177, ACTA2, ANPEP, and CAMP were downregulated. Then, with the help of our constructed ceRNA network and functional annotation enrichment, we speculated that inflammatory pathways (such as the apelin signalling pathway) and lipid metabolism pathways (such as fatty acid metabolism) may be involved in the regulation of SVR. These discoveries lay a foundation for further mechanistic research and provide a direction for individualized drug administration.
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页数:13
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共 42 条
  • [1] ATP-binding cassette transmembrane transporters and their epigenetic control in cancer: an overview
    Arrigoni, Elena
    Galimberti, Sara
    Petrini, Mario
    Danesi, Romano
    Di Paolo, Antonello
    [J]. EXPERT OPINION ON DRUG METABOLISM & TOXICOLOGY, 2016, 12 (12) : 1419 - 1432
  • [2] A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    Bolstad, BM
    Irizarry, RA
    Åstrand, M
    Speed, TP
    [J]. BIOINFORMATICS, 2003, 19 (02) : 185 - 193
  • [3] The Gene Ontology Resource: 20 years and still GOing strong
    Carbon, S.
    Douglass, E.
    Dunn, N.
    Good, B.
    Harris, N. L.
    Lewis, S. E.
    Mungall, C. J.
    Basu, S.
    Chisholm, R. L.
    Dodson, R. J.
    Hartline, E.
    Fey, P.
    Thomas, P. D.
    Albou, L. P.
    Ebert, D.
    Kesling, M. J.
    Mi, H.
    Muruganujian, A.
    Huang, X.
    Poudel, S.
    Mushayahama, T.
    Hu, J. C.
    LaBonte, S. A.
    Siegele, D. A.
    Antonazzo, G.
    Attrill, H.
    Brown, N. H.
    Fexova, S.
    Garapati, P.
    Jones, T. E. M.
    Marygold, S. J.
    Millburn, G. H.
    Rey, A. J.
    Trovisco, V.
    dos Santos, G.
    Emmert, D. B.
    Falls, K.
    Zhou, P.
    Goodman, J. L.
    Strelets, V. B.
    Thurmond, J.
    Courtot, M.
    Osumi-Sutherland, D.
    Parkinson, H.
    Roncaglia, P.
    Acencio, M. L.
    Kuiper, M.
    Laegreid, A.
    Logie, C.
    Lovering, R. C.
    [J]. NUCLEIC ACIDS RESEARCH, 2019, 47 (D1) : D330 - D338
  • [4] Recovery of left ventricular dysfunction after sacubitril/valsartan: predictors and management
    Chang, Hung-Yu
    Chen, Kuan-Chun
    Fong, Man-Cai
    Feng, An-Ning
    Fu, Hao-Neng
    Huang, Kuan-Chih
    Chong, Eric
    Yin, Wei-Hsian
    [J]. JOURNAL OF CARDIOLOGY, 2020, 75 (03) : 233 - 241
  • [5] Long noncoding RNA ANRIL regulates endothelial cell activities associated with coronary artery disease by up-regulating CLIP1, EZR, and LYVE1 genes
    Cho, Hyosuk
    Shen, Gong-Qing
    Wang, Xiaofeng
    Wang, Fan
    Archacki, Stephen
    Li, Yabo
    Yu, Gang
    Chakrabarti, Susmita
    Chen, Qiuyun
    Wang, Qing Kenneth
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2019, 294 (11) : 3881 - 3898
  • [6] Collet JP, 2021, REV ESP CARDIOL, V74, DOI [10.1093/eurheartj/ehaa575, 10.1016/j.rec.2021.05.002]
  • [7] Improvement in Left Ventricular Ejection Fraction in Outpatients With Heart Failure With Reduced Ejection Fraction Data From CHAMP-HF
    DeVore, Adam D.
    Hellkamp, Anne S.
    Thomas, Laine
    Albert, Nancy M.
    Butler, Javed
    Patterson, J. Herbert
    Spertus, John A.
    Williams, Fredonia B.
    Duffy, Carol I.
    Hernandez, Adrian F.
    Fonarow, Gregg C.
    [J]. CIRCULATION-HEART FAILURE, 2020, 13 (07) : 116 - 122
  • [8] Left Ventricular Ejection Fraction Recovery in Patients with Heart Failure and Reduced Ejection Fraction Treated with Sacubitril/Valsartan
    Diez-Villanueva, Pablo
    Vicent, Lourdes
    de la Cuerda, Francisco
    Esteban-Fernandez, Alberto
    Gomez-Bueno, Manuel
    de Juan-Baguda, Javier
    Manuel Iniesta, Angel
    Ayesta, Ana
    Rojas-Gonzalez, Antonio
    Bover-Freire, Ramon
    Iglesias, Diego
    Garcia-Aguado, Marcos
    Angel Perea-Egido, Jesus
    Salamanca, Jorge
    Martinez-Selles, Manuel
    [J]. CARDIOLOGY, 2020, 145 (05) : 275 - 282
  • [9] Drug therapy - Pharmacogenomics - Drug disposition, drug targets, and side effects
    Evans, WE
    McLeod, HL
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2003, 348 (06) : 538 - 549
  • [10] Long noncoding RNA NEAT1 modulates immune cell functions and is suppressed in early onset myocardial infarction patients
    Gast, Martina
    Rauch, Bernhard H.
    Haghikia, Arash
    Nakagawa, Shinichi
    Haas, Jan
    Stroux, Andrea
    Schmidt, David
    Schumann, Paul
    Weiss, Stefan
    Jensen, Lars
    Kratzer, Adelheid
    Kraenkel, Nicolle
    Mueller, Christian
    Boernigen, Daniela
    Hirose, Tetsuro
    Blankenberg, Stefan
    Escher, Felicitas
    Kuehl, Anja A.
    Kuss, Andreas W.
    Meder, Benjamin
    Landmesser, Ulf
    Zeller, Tanja
    Poller, Wolfgang
    [J]. CARDIOVASCULAR RESEARCH, 2019, 115 (13) : 1886 - 1906