Differential gene expression patterns in ST-elevation Myocardial Infarction and Non-ST-elevation Myocardial Infarction
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作者:
Elahimanesh, Mohammad
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Elahimanesh, Mohammad
[1
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Shokri, Nafiseh
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Shokri, Nafiseh
[1
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Mahdinia, Elmira
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Mahdinia, Elmira
[1
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Mohammadi, Payam
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Mohammadi, Payam
[1
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Parvaz, Najmeh
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Parvaz, Najmeh
[1
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Najafi, Mohammad
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Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Iran Univ Med Sci, Cellular & Mol Res Ctr, Tehran, IranIran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
Najafi, Mohammad
[1
,2
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机构:
[1] Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
[2] Iran Univ Med Sci, Cellular & Mol Res Ctr, Tehran, Iran
The ST-elevation Myocardial Infarction (STEMI) and Non-ST-elevation Myocardial Infarction (NSTEMI) might occur because of coronary artery stenosis. The gene biomarkers apply to the clinical diagnosis and therapeutic decisions in Myocardial Infarction. The aim of this study was to introduce, enrich and estimate timely the blood gene profiles based on the high-throughput data for the molecular distinction of STEMI and NSTEMI. The text mining data (50 genes) annotated with DisGeNET data (144 genes) were merged with the GEO gene expression data (5 datasets) using R software. Then, the STEMI and NSTEMI networks were primarily created using the STRING server, and improved using the Cytoscape software. The high-score genes were enriched using the KEGG signaling pathways and Gene Ontology (GO). Furthermore, the genes were categorized to determine the NSTEMI and STEMI gene profiles. The time cut-off points were identified statistically by monitoring the gene profiles up to 30 days after Myocardial Infarction (MI). The gene heatmaps were clearly created for the STEMI (high-fold genes 69, low-fold genes 45) and NSTEMI (high-fold genes 68, low-fold genes 36). The STEMI and NSTEMI networks suggested the high-score gene profiles. Furthermore, the gene enrichment suggested the different biological conditions for STEMI and NSTEMI. The time cut-off points for the NSTEMI (4 genes) and STEMI (13 genes) gene profiles were established up to three days after Myocardial Infarction. The study showed the different pathophysiologic conditions for STEMI and NSTEMI. Furthermore, the high-score gene profiles are suggested to measure up to 3 days after MI to distinguish the STEMI and NSTEMI.
机构:
Russian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk, RussiaRussian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk, Russia
Babushkina, N. P.
Nikolaeva, A. M.
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Russian Acad Sci, Tomsk Natl Res Med Ctr, Cardiol Res Inst, Tomsk, RussiaRussian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk, Russia
Nikolaeva, A. M.
Dolbnya, A. D.
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Siberian State Med Univ, Minist Healthcare Russian Federat, Tomsk, RussiaRussian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk, Russia
Dolbnya, A. D.
Shavrak, V. E.
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Tomsk State Univ, Tomsk, RussiaRussian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk, Russia
Shavrak, V. E.
Ryabov, V. V.
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Russian Acad Sci, Tomsk Natl Res Med Ctr, Cardiol Res Inst, Tomsk, Russia
Siberian State Med Univ, Minist Healthcare Russian Federat, Tomsk, Russia
Tomsk State Univ, Tomsk, RussiaRussian Acad Sci, Tomsk Natl Res Med Ctr, Res Inst Med Genet, Tomsk, Russia
机构:
Mayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Mayo Clin, Dept Cardiovasc Med, Rochester, MN USAMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Omer, Mohamed A.
Exaire, Jose E.
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Mayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Mayo Clin, Dept Cardiovasc Med, Rochester, MN USAMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Exaire, Jose E.
Jentzer, Jacob C.
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Mayo Clin, Rochester, MN USAMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Jentzer, Jacob C.
Sandoval, Yader B.
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Mayo Clin, Rochester, MN USAMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Sandoval, Yader B.
Singh, Mandeep
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Mayo Clin, Rochester, MN USAMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Singh, Mandeep
Cagin, Charles R.
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Mayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Mayo Clin, Dept Cardiovasc Med, Rochester, MN USAMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Cagin, Charles R.
Elgendy, Islam Y.
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Weill Cornell Med Qatar, Div Cardiol, Doha, QatarMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Elgendy, Islam Y.
Tak, Tahir
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Mayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
Mayo Clin, Dept Cardiovasc Med, Rochester, MN USAMayo Clin Hlth Syst, Cardiovasc Serv, La Crosse, WI USA
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Med, TIMI Study Grp,Cardiovasc Med, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Med, TIMI Study Grp,Cardiovasc Med, 75 Francis St, Boston, MA 02115 USA
Waks, Jonathan W.
Scirica, Benjamin M.
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Harvard Med Sch, Brigham & Womens Hosp, Dept Med, TIMI Study Grp,Cardiovasc Med, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Med, TIMI Study Grp,Cardiovasc Med, 75 Francis St, Boston, MA 02115 USA