Differential gene expression patterns in ST-elevation Myocardial Infarction and Non-ST-elevation Myocardial Infarction

被引:1
作者
Elahimanesh, Mohammad [1 ]
Shokri, Nafiseh [1 ]
Mahdinia, Elmira [1 ]
Mohammadi, Payam [1 ]
Parvaz, Najmeh [1 ]
Najafi, Mohammad [1 ,2 ]
机构
[1] Iran Univ Med Sci, Fac Med Sci, Clin Biochem Dept, Tehran, Iran
[2] Iran Univ Med Sci, Cellular & Mol Res Ctr, Tehran, Iran
关键词
STEMI; NSTEMI; Gene profile; Gene network; SENSITIVITY TROPONIN-T; C-REACTIVE PROTEIN; PERCUTANEOUS CORONARY INTERVENTION; ACID-BINDING PROTEIN; ASYMMETRIC DIMETHYLARGININE ADMA; GELATINASE-ASSOCIATED LIPOCALIN; VENTRICULAR EJECTION FRACTION; LONG NONCODING RNAS; ALL-CAUSE MORTALITY; SEGMENT ELEVATION;
D O I
10.1038/s41598-024-54086-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The ST-elevation Myocardial Infarction (STEMI) and Non-ST-elevation Myocardial Infarction (NSTEMI) might occur because of coronary artery stenosis. The gene biomarkers apply to the clinical diagnosis and therapeutic decisions in Myocardial Infarction. The aim of this study was to introduce, enrich and estimate timely the blood gene profiles based on the high-throughput data for the molecular distinction of STEMI and NSTEMI. The text mining data (50 genes) annotated with DisGeNET data (144 genes) were merged with the GEO gene expression data (5 datasets) using R software. Then, the STEMI and NSTEMI networks were primarily created using the STRING server, and improved using the Cytoscape software. The high-score genes were enriched using the KEGG signaling pathways and Gene Ontology (GO). Furthermore, the genes were categorized to determine the NSTEMI and STEMI gene profiles. The time cut-off points were identified statistically by monitoring the gene profiles up to 30 days after Myocardial Infarction (MI). The gene heatmaps were clearly created for the STEMI (high-fold genes 69, low-fold genes 45) and NSTEMI (high-fold genes 68, low-fold genes 36). The STEMI and NSTEMI networks suggested the high-score gene profiles. Furthermore, the gene enrichment suggested the different biological conditions for STEMI and NSTEMI. The time cut-off points for the NSTEMI (4 genes) and STEMI (13 genes) gene profiles were established up to three days after Myocardial Infarction. The study showed the different pathophysiologic conditions for STEMI and NSTEMI. Furthermore, the high-score gene profiles are suggested to measure up to 3 days after MI to distinguish the STEMI and NSTEMI.
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页数:21
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共 291 条
[151]   Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis [J].
Liu, Wei ;
Li, Yuling ;
Zhang, Yan ;
Li, Su ;
Chen, Yuqiong ;
Han, Bing ;
Lu, Yao .
BIOSCIENCE REPORTS, 2023, 43 (07)
[152]   Plasma miR-1, miR-208, miR-499 as potential predictive biomarkers for acute myocardial infarction: An independent study of Han population [J].
Liu, Xian ;
Fan, Zhanwei ;
Zhao, Tianshu ;
Cao, Wei ;
Zhang, Lan ;
Li, He ;
Xie, Qing ;
Tian, Ye ;
Wang, Baichun .
EXPERIMENTAL GERONTOLOGY, 2015, 72 :230-238
[153]   High Levels of Asymmetric Dimethylarginine Are Strongly Associated with Low HDL in Patients with Acute Myocardial Infarction [J].
Lorin, Julie ;
Guilland, Jean-Claude ;
Korandji, Claudia ;
Touzery, Claude ;
Bichat, Florence ;
Chagnon, Aline ;
Cottin, Yves ;
Rochette, Luc ;
Vergely, Catherine ;
Zeller, Marianne .
PLOS ONE, 2013, 8 (06)
[154]   Optimization of GRACE Risk Stratification by N-Terminal Pro-B-type Natriuretic Peptide Combined With D-Dimer in Patients With Non-ST-Elevation Myocardial Infarction [J].
Lu, Peng-Ju ;
Gong, Xiao-Wen ;
Liu, Yin ;
Tian, Feng-Shi ;
Zhang, Wen-Juan ;
Liu, Ying-Wu ;
Yao, Zhu-Hua ;
Wang, Ji-Xiang ;
Han, Peng ;
Yang, Ya-Nan ;
Cui, Zhuang ;
Gao, Jing .
AMERICAN JOURNAL OF CARDIOLOGY, 2021, 140 :13-19
[155]   Serum high concentrations of homocysteine and low levels of folic acid and vitamin B12 are significantly correlated with the categories of coronary artery diseases [J].
Ma, Yan ;
Peng, Duanliang ;
Liu, Chenggui ;
Huang, Chen ;
Luo, Jun .
BMC CARDIOVASCULAR DISORDERS, 2017, 17
[156]   Culprit site extracellular DNA and microvascular obstruction in ST-elevation myocardial infarction [J].
Mangold, Andreas ;
Ondracek, Anna S. ;
Hofbauer, Thomas M. ;
Scherz, Thomas ;
Artner, Tyler ;
Panagiotides, Noel ;
Beitzke, Dietrich ;
Ruzicka, Gerhard ;
Nistler, Sonja ;
Wohlschlaeger-Krenn, Evelyne ;
Winker, Robert ;
Quehenberger, Peter ;
Traxler-Weidenauer, Denise ;
Spannbauer, Andreas ;
Gyoengyoesi, Mariann ;
Testori, Christoph ;
Lang, Irene M. .
CARDIOVASCULAR RESEARCH, 2022, 118 (08) :2006-2017
[157]   Role of plaque calcification regulators osteoprotegerin and matrix Gla-proteins in stable angina and acute myocardial infarction [J].
Margonato, Alberto ;
Gorla, Riccardo ;
Macchi, Andrea ;
Buzzetti, Fabio ;
Franzoni, Irene ;
Pedrigi, Maria Cristina ;
Rosa, Isabella ;
Sirtori, Marcella ;
Villa, Isabella ;
Rubinacci, Alessandro .
JOURNAL OF CARDIOVASCULAR MEDICINE, 2015, 16 (03) :156-162
[158]   Biomarkers in Acute Myocardial Infarction Diagnosis and Prognosis [J].
Martinez, Paula F. ;
Oliveira-Junior, Silvio A. ;
Polegato, Bertha F. ;
Okoshi, Katashi ;
Okoshi, Marina P. .
ARQUIVOS BRASILEIROS DE CARDIOLOGIA, 2019, 113 (01) :40-41
[159]  
Mehrpooya M., 2020, Adv. J. Emerg. Med, V4
[160]   Comparison of high-sensitivity C-reactive protein level between systemic and coronary circulation in patients with acute myocardial infarction [J].
Meng, Haoyu ;
Zhang, Min ;
Chen, Pengsheng ;
Wang, Ze-Mu ;
Chen, Bo ;
Yang, Zhijian .
ACTA BIOCHIMICA ET BIOPHYSICA SINICA, 2014, 46 (02) :161-162